Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq297 91.5 1e-13 seq71 91.5 1e-13 >seq297 Length=30052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | || | ||| | || || || ||||| || ||||| || | Sbjct 4153 CCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGAC 4212 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| || || || ||||| ||||||||||||| ||||| || || Sbjct 4213 AAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGA 4272 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| | || | | || | ||||||| | ||||| Sbjct 4273 ATGCCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAACC 4332 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| || |||| || || || ||||| || || || || |||||| Sbjct 4333 TCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCATA 4380 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || ||||| || ||||| ||| | | | ||| ||||||| ||||| ||||| ||| | Sbjct 3961 TCCTTTTGGATGTTGTAATCGGAGAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAG 4020 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||||||||| || || || || | || || || || ||||||| | |||| | Sbjct 4021 ATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATTG 4080 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | || ||||| || || || || | || || || || || || || Sbjct 4081 TCGATTGTGTCAGAGGACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACG 4140 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 4141 AAGATCTGCATA 4152 >seq71 Length=90593 Score = 91.5 bits (100), Expect = 1e-13 Identities = 256/390 (66%), Gaps = 5/390 (1%) Strand=Plus/Plus Query 131645 TCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTT 131704 |||||||||||||| |||| ||| || ||| | || || |||||||| | ||| | Sbjct 32723 TCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGCATAGAACAGATCACGGGCTCTG 32782 Query 131705 TTCTCTTCTGTACCCATAAtttttttCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763 || || |||| | || || || || || || || || | || || ||||| Sbjct 32783 ACTTCCTCCTTACCG-TGGTTCTTGCGAAGATCCAAGAATTCAAAGACATCGGCGTGCCA 32841 Query 131764 GGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACG 131820 || |||| || | || | ||||| ||||||| || ||||| | |||| | Sbjct 32842 AGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCCTTGGTCGACATATCT 32901 Query 131821 AACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCT 131880 | |||||||| | || || | |||||| | | ||| |||| || ||||||| Sbjct 32902 GGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGAAGAACCGTTGGTGCC 32961 Query 131881 CTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTA 131940 ||||||| ||| | || | ||| ||||||||| || || ||||| ||| || Sbjct 32962 ACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACCGATACCACCGGCGGT 33021 Query 131941 TTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGC 132000 || ||||| | || || | | || |||| ||||||||||| | ||| ||| | Sbjct 33022 CTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTCGATGCTATCCTCCTT 33081 Query 132001 AATGTCGACTAAAAAGCAAGAGGACAACTG 132030 || ||||| | |||||||| | || ||| Sbjct 33082 CATATCGACAAGGAAGCAAGAAGCCAGCTG 33111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424928946630936