Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq167 113 5e-20 seq100 102 1e-16 seq71 96.9 4e-15 seq102 82.4 9e-11 >seq167 Length=302909 Score = 113 bits (124), Expect = 5e-20 Identities = 222/325 (68%), Gaps = 19/325 (6%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||||||||| ||||| | ||||| | || ||||| |||||||| || Sbjct 127154 AAACCATCCATCTCAGTCAAGATCTGGTTCAGTGTGCTCTCCCGCTCATCATTACCT--- 127098 Query 9674 ATACCACC--AGCACTGCGTTGCTTT-------CCCACGGCATCAATCTCATCAATGAAG 9724 ||||| ||| |||| | ||| | || | ||||||||| || || ||||| Sbjct 127097 ---CCACCGAAGCTCTGCTTGGCTCTGGATTTACCGATGGCATCAATTTCGTCGATGAAA 127041 Query 9725 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 9784 | |||||| || ||| | || ||| | || ||||| || ||||| | || Sbjct 127040 ATGATGCAAGGGGCATTCTTCCGGGCGTTGGCGAAAAGATCACGGACACGGGAAGGACCG 126981 Query 9785 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 9842 ||||| || |||||||| || || | | | || || || || | ||| ||||| | Sbjct 126980 ACACCGACGAACATCTCGACGAATTCGGAACCGCTGA-CACTGAA-GAAAGGGACGCCGG 126923 Query 9843 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9902 ||||||| ||| | || ||||| | |||||||| ||||| || ||||| ||||| Sbjct 126922 ATTCACCAGCAGTAGCCTTTGCGAGTAATGTCTTACCTGTACCAGGAGGACCCGAGAGGA 126863 Query 9903 GGGCACCTCGTGGAATCTTGGCGCC 9927 |||||| || ||||||||||| || Sbjct 126862 TGGCACCGCGAGGAATCTTGGCACC 126838 >seq100 Length=80470 Score = 102 bits (112), Expect = 1e-16 Identities = 102/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAG 94885 ||| ||||| ||||||||||| || | ||| ||| | || | ||||| |||||||| | Sbjct 36541 TGTGGAGGGAATCTTCTTCTCCGGAT-CTTTTGCTTCCATCTTCTGGCTGAAGAAGCGTG 36599 Query 94886 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 94945 | | ||||| |||||| |||||||||||||| ||||||||||||||||| || ||| Sbjct 36600 GATTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACA 36659 Query 94946 AAGAGTTTGC 94955 || ||||| Sbjct 36660 CGGACTTTGC 36669 >seq71 Length=90593 Score = 96.9 bits (106), Expect = 4e-15 Identities = 461/719 (64%), Gaps = 18/719 (3%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | |||||||| || |||| ||||||||||| | || | ||||||||||| || Sbjct 32529 TGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGCAACCCCTTTATGCTTTACAAGGAT 32470 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||| ||| | ||||| || || |||||| ||||| || || ||||| || || Sbjct 32469 GCCTGCAACAAGAAGAGCAACCAGAAGAATCTGGGTACTATTCGCAGCTCCAACCTTTGC 32410 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || || ||| | || | | | || || ||||| || ||||| || || || Sbjct 32409 ACGGAGATCATTGAGTACAGTGCTCCTGACGAAGTTGCTGTCTGCAACCTGGCTTCTCTC 32350 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 105126 || || || | | || || | | | | || | | ||| | | || || ||||| Sbjct 32349 GCCCTTCCTACCTTCGTCGACGCGGCG-CGTGGAGAGTATGACTTCGGCAAGCTGCACGA 32291 Query 105127 AGTTACGAAAA-CT--GTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 105183 ||| | | || || ||| | | |||| | ||||| | || | |||||| Sbjct 32290 GGTTGTGCAGGTCTTGGTTCGCAA---CTTGAACAAGATCATTGACATCAACTATTACCC 32234 Query 105184 CGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCA 105240 ||| ||| | | | | | | || ||| | || || || |||| ||| ||||| | Sbjct 32233 TGTTCCCGAGGC--CAAGAAGAGC-AACATGCGGCATCGCCCCATTGCTCTTGGTGTCAA 32177 Query 105241 GGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 105299 ||||| || |||| ||| || | || || | | || || || | ||| || | Sbjct 32176 TGGTCTGGCCGATGCCTTCCTTGCCCTG-CGTCTGCCGTTCGACTCTGCCGAGGCCAGAC 32118 Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCGAGTTCAGAG 105358 | | || | || ||||||||||| ||||||| ||| |||| || | ||| Sbjct 32117 AGCTGAACATCCAGATCTTTGAGACCATCTATCACGGTGCT-TTGACTGCTTCGTGTGAG 32059 Query 105359 TTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTG 105418 |||| ||| ||| || |||||||||| ||||| || || | || ||||| | Sbjct 32058 CTGGCCAAGGAGTTTGGCCCTTATGAAACCTACGAGGGCTCCCCCGTCTCTCAAGGTATT 31999 Query 105419 CTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAG 105478 ||||| | ||| |||||||| | | ||| | | || |||||||| ||||| ||| Sbjct 31998 CTTCAGTATGACATGTGGGACAGAACGCCCACGGACCTCTGGGACTGGGATGCTCTGAAG 31939 Query 105479 GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCC 105538 | ||| ||| ||| | || |||||| | | |||| || ||||| || || Sbjct 31938 GCGAAGATCGCTCAGAGCGGTGTGCGCAACAGTTTGTTGGTGGCACCGATGCCCACTGCA 31879 Query 105539 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 |||| || || |||| || ||||| || || |||||||| |||||||||| Sbjct 31878 AGCACCAGCCAGATTCTGGGCTTCAACGAATGTTTCGAGCCCTACACCTCGAACATCTA 31820 >seq102 Length=80107 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||| || | ||| |||||||||| |||| || || | || || | ||||||| Sbjct 31406 GGCGTCCAACTCGTCAATGAAGATGATGGCGGGCGACTTGTTCCGGGCTTGTGCAAAGAG 31347 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 9822 || || |||||||||||||| ||||| ||| ||| ||| | || || | | ||| Sbjct 31346 CTCACGAACACGCTTGGCGCCGACACCCACATACACCTCATCGAA-TTCGGAACCAGACA 31288 Query 9823 T-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | | || |||||| ||| || ||| || || | || |||||||| || ||||| || | Sbjct 31287 TGTAGAAGAAGGGAACACCAGCTTCTCCAGCGACAGCACGGGCGAGCAGGGTCTTTCCTG 31228 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 |||| || ||| |||| || |||| ||| | ||| ||||| Sbjct 31227 TACCAGGAGGTCCCACGAGAAGCACACCCTTTGGCAATTTGCCGCCA 31181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253122829720