Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq999 181 3e-40 seq297 181 3e-40 seq269 114 4e-20 >seq999 Length=99198 Score = 181 bits (200), Expect = 3e-40 Identities = 480/729 (66%), Gaps = 7/729 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || || || | ||||| || || || ||||| | ||| | | |||| | Sbjct 49219 CCGCTGTCGGTATTGACCTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACC 49278 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| || |||| Sbjct 49279 GCATTGAAATTATTGCCAACGACCAGGGTAACCGCACTACTCCCTCGTTCGTGGCTTTTA 49338 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || |||| || || || | | Sbjct 49339 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCTCACA 49398 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || || || ||||| ||||| || || ||| | | || || | | | || Sbjct 49399 ACACCGTCTTCGATGCCAAGCGTCTGATCGGTCGTCGGTTCCAGGATGCTGAGGTTCAG- 49457 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || ||| | || || | || || | || || | | ||| || | || || || || Sbjct 49458 -TCCGATATGAAGCACTGGCCCTTCAAGGTCGT-CGAGAAG--GGCGGCAAGCCCATCAT 49513 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||||||| | || || || || || || || || ||||| || || ||||| Sbjct 49514 TGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACTCCTGAGGAAATCTCCTCCATGGT 49573 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || | ||||| || || | |||| || || | | ||||| Sbjct 49574 CCTGACCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGCACTGTCAACAACGCTGT 49633 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || | |||||| || || || |||||||| Sbjct 49634 CATAACCGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCT 49693 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || | || || || | || || || || || ||||| || || ||||| || Sbjct 49694 CATCGCCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCCGCCATTGCCTA 49753 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 ||| || || || | | ||| || || |||| || || ||| | |||||||| Sbjct 49754 TGGTCTGGACAAGAAGGCTGAGGGCGAGCGTAACGTTCTGATCTTCGATCTCGGTGGTGG 49813 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || || || || |||| ||||| || || || || || || || || Sbjct 49814 TACCTTCGATGTTTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACCGC 49873 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||| || || |||||||| || || || || || ||||| || || || || || Sbjct 49874 TGGTGACACTCACCTTGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTAAA 49933 Query 349915 AGAATTTAA 349923 ||||| || Sbjct 49934 CGAATTCAA 49942 >seq297 Length=30052 Score = 181 bits (200), Expect = 3e-40 Identities = 181/232 (78%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || ||||||||||| || ||||| ||||| || || ||||| Sbjct 4149 CATACCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATC 4208 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || |||||||||||||| ||||| ||||| || ||||| |||||||| || Sbjct 4209 AGACAAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGG 4268 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||||| || || ||||||||||| || ||| || ||||| || || | || || | | Sbjct 4269 GGGAATGCCCTCCTTATCCTGAATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACT 4327 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || | ||| | ||||||||||| || || || || ||||||||||| Sbjct 4328 CAACCTCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 Score = 141 bits (156), Expect = 3e-28 Identities = 176/237 (74%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 140502 TTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTA 140561 ||| |||| ||||| || | | ||||| || || || || ||| ||||| || || Sbjct 3917 TTTAACAT-CCACCGCGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTG 3975 Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 ||||| || | || ||||| ||||| || || || ||||| ||||| ||||| ||||| Sbjct 3976 TAATCGGAGAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGG 4035 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGA 140680 || || ||||| ||||| || || || || || ||| || ||||| || || | ||||| Sbjct 4036 TCTGGGGGAATGCCTTCCTTGTCTTGGATCTT-GCTCTTCACATTGTCGATTGTGTCAGA 4094 Query 140681 TGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || ||||||| ||||||||||| ||||| || || || |||||||| Sbjct 4095 GGACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 123 bits (136), Expect = 8e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||| || || |||||||| || || ||||| || || || Sbjct 4682 CATGCCACCACGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTC 4741 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||| ||||| | ||| ||||| ||||| Sbjct 4742 GGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGG 4801 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || ||||||||||| || | || ||||| ||||| | || | ||| | Sbjct 4802 AGGGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTGGACT 4860 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || | || | ||||| || || || || || || || |||||||| Sbjct 4861 CGACCTCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 4912 Score = 111 bits (122), Expect = 5e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || || || || || || || || || Sbjct 4377 CATACCACCACGCAGACGAAGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTC 4436 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || || ||||| || || || ||||| ||||| || || ||||| || || Sbjct 4437 GGACAAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGG 4496 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || || ||||| || || | || ||||||||||| | || | ||| || Sbjct 4497 AGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATTGTGTC-GCTGGATT 4555 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 | || ||||| || | ||||| || || || || || || Sbjct 4556 CCACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAAC 4595 >seq269 Length=34053 Score = 114 bits (126), Expect = 4e-20 Identities = 209/306 (68%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 378168 GTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCG 378227 |||||| ||||| |||||| | ||||| | ||||| || || || | || ||| Sbjct 25441 GTTTCTGACAGTGCCATCATACTTCACCATGACCTCTTCCAAAGCCTTGACCAGCTTTCG 25500 Query 378228 AGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACC 378287 |||||||||||| | | ||| || || ||||||||||| | ||| | |||||| | Sbjct 25501 CTGAATATAACCAGTCTCAGCAGTCTTGACAGCAGTATCAATCAGACCTTCTCGACCAGC 25560 Query 378288 CATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAA 378347 ||| ||||||||||| |||||||| || || || |||| | | | || | || | ||| Sbjct 25561 CATGGCATGGAAGAAGAATTCAGTTGGGGTTAGACCACGCAGATAAGAGTTTTCCACAAA 25620 Query 378348 TCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407 ||| | | | || || | |||| || || |||| || | ||||||| | || Sbjct 25621 TCCGCGAGATTCCGGAGAGTAGTCATCCTTGGTGAAATGGGGAAGAGTACGATATTTGAA 25680 Query 378408 CCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGC 378467 ||| ||||||| || || || || || ||| || || | ||| | ||| |||| Sbjct 25681 TCCAAATGGAATACGCTTGCCTTCGACGGACTGCTGGCCCACAACAGCAGTCATCTGAGA 25740 Query 378468 AATATT 378473 ||||| Sbjct 25741 GATATT 25746 Score = 96.9 bits (106), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || || || ||| || | |||||||||||||||||||| || Sbjct 24716 CGAGGAACACCAAGGGTGACGTT---TTTCGACGAGACACCAGCAAAGTGGAAAGTGTTC 24772 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | || | || |||| |||||||||||| ||||| || |||| || ||||||||||| Sbjct 24773 AAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCAAGCACACCAACCATTTCA 24832 Query 377578 CCAGGATTGACAATAGCCT 377596 ||||| || || ||||| Sbjct 24833 CCAGGGTTAGCACCAGCCT 24851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515233956850559