Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq297 179 4e-40 seq578 132 5e-26 seq71 109 6e-19 seq611 107 2e-18 >seq297 Length=30052 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || ||||| |||||||| || | ||||||||||| Sbjct 4379 ATGCAGATTTTCGTTAAGACTCTCACCGGAAAGACTATCACATTAGAGGTTGAGTCTTCA 4320 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| || |||||||| |||||||| ||||| ||||| ||| Sbjct 4319 GACACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 4260 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || |||||||| || |||| |||||| | | || || || Sbjct 4259 CAGCGTCTCATTTTTGCCGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAC 4200 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||||| |||||||| ||| | ||||| |||||||| Sbjct 4199 ATCCAAAAGGAGTCCACACTTCATCTTGTCCTCCGTCTGCGCGGTGG 4153 Score = 172 bits (190), Expect = 6e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || |||||||| || || | ||||| ||||| Sbjct 4915 ATCATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTAGAGGTCGAGTCC 4856 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | |||| ||| | ||| | || |||||||| |||||||| || ||||| ||| Sbjct 4855 AGCGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGAC 4796 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||| | || || ||||| ||||| |||||||||| || || || | ||||| Sbjct 4795 CAGCAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTAC 4736 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || |||||||| ||||| || || || |||||||||| ||||| Sbjct 4735 AACATTCAGAAGGAATCTACTCTGCACCTGGTTCTGCGTCTTCGTGGTGG 4686 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| ||||| ||||| || ||||||||||| | Sbjct 4151 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 4092 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| || || || |||||||| || ||||| ||||||||| Sbjct 4091 GACACAATCGACAATGTGAAGAGCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 4032 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| || || || | || ||||| | || || || Sbjct 4031 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGGCGGACCCTCTCCGATTACAAC 3972 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||||||||| ||| || || || || ||||||| ||||||||| Sbjct 3971 ATCCAAAAGGAGAGCACACTCCACCTGGTTCTGCGTCTCCGCGGTGGA 3924 Score = 149 bits (164), Expect = 7e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 || ||||| || || |||||||| || ||||||||||| || || | || | |||| Sbjct 4595 GTTAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCCAGCGACACAATTGAT 4536 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || |||||||||||||| || ||||| ||||||||||| || || Sbjct 4535 AATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTGATC 4476 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||||||||| || || || | || || | | ||||| || |||| |||||| Sbjct 4475 TTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGTCCGACTACAACATCCAGAAGGAA 4416 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||| || ||| | ||||| || ||||| Sbjct 4415 TCGACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 4381 >seq578 Length=126255 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || |||||||| | || | ||| Sbjct 60368 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 60427 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||||| || || |||||||||||||| || || || ||||||||||| || Sbjct 60428 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTG 60487 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 60488 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 60546 Query 27594 GG 27595 || Sbjct 60547 GG 60548 >seq71 Length=90593 Score = 109 bits (120), Expect = 6e-19 Identities = 370/571 (65%), Gaps = 13/571 (2%) Strand=Plus/Plus Query 81187 TCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCA 81246 || || ||||| | ||| |||||| || | ||| || ||||||||| ||| Sbjct 32687 TCATTGGGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCA 32746 Query 81247 GGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306 || |||| || || |||||| || ||| | | ||||| | ||| ||||| | Sbjct 32747 GGAGTCCACAGAGCATAGAACAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTG 32806 Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGAC 81366 || | || | || || | || || || ||||| |||||||| || | ||| | | Sbjct 32807 CGAAGATCCAAGAATTCAAAGACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCG 32866 Query 81367 CCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 || ||| | || || |||| ||| || | |||||| ||| || ||||| | | Sbjct 32867 CCAGGGCGCTTATTTCCTCCTTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGC 32926 Query 81424 ATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGC 81483 || || | ||||||| || |||||| || || | || || || | || || Sbjct 32927 ATGGGAACAATACCATTGGAAGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGG 32986 Query 81484 ACCTTGC--TGATTGA-AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGG 81540 | ||| ||| | ||||||||| ||||| | ||| || ||| |||||| Sbjct 32987 A---TGCGGTGAACGTTAAGACCGATACCACCGGCGGTCTTCGAGATCATAGCACAAGTC 33043 Query 81541 TTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTT 81600 |||| || || || || || ||||||||||| | ||||| || | | ||| || Sbjct 33044 TTCAGTGTGTCGTAGATACCTTCGATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAA 33103 Query 81601 GACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAAT 81658 | || ||| || || ||| || ||||||||||| || || | || ||| |||| | Sbjct 33104 GCCAGCTGCGG--TTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGT 33161 Query 81659 AACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATAC 81718 | | ||||| || | ||||| || || | | ||||| | ||||||||||| Sbjct 33162 ATTTCTGGGACATGAGATGGTAGGTCTCAATGGCCTTTTCGATATCATTACCGTGAATAC 33221 Query 81719 CGATAGCTACACGCATAAACATGTACTGGGG 81749 ||| || |||||||| |||| || |||||| Sbjct 33222 CGACGGCAACACGCATCAACAAGTGCTGGGG 33252 >seq611 Length=248973 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||||||||| || || |||||||||||||| || || ||||| ||||| |||||| Sbjct 196953 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 196894 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | |||||||| | ||||| || |||| ||||| || || || || || || | Sbjct 196893 GACGGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 196834 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 196833 CGCCTGCGTGGTGG 196820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570302893289360