Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017-
07-31] 1,053 sequences; 31,330,139 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq297 118 7e-22
>seq297
Length=30052
Score = 118 bits (130), Expect = 7e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||| ||||| |||||||||||||| ||||| ||||| || || || |||
Sbjct 3934 AGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAGAGGGTCCGC 3993
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| || || ||||| || || || | |||||| ||||| || || | || |||
Sbjct 3994 CCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCTTCC 4053
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || | || || | |||||||| | ||| || |||| ||
Sbjct 4054 TTGTCTTGGATC-TTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAACCTCCAGTGT 4112
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | || || || || ||||||||
Sbjct 4113 AATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151
Score = 82.4 bits (90), Expect = 5e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| || ||| ||||||||| ||||| ||||| || | || ||
Sbjct 4162 AGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGACAAGGTACGG 4221
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||||||||| || |||||||| || | |||||| || || || || | ||||||
Sbjct 4222 CCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCC 4281
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||||| | || || | || |||||| ||| || || | ||
Sbjct 4282 TTATCCTGAATCTTGC-TCTTGACATTGTCGATGGTGTCTGAAGACTCAACCTCTAATGT 4340
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | || || || |||||||||||
Sbjct 4341 GATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314725560937349
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |