Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq71 214 3e-50 >seq71 Length=90593 Score = 214 bits (236), Expect = 3e-50 Identities = 590/897 (66%), Gaps = 8/897 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || | ||||| ||| || || |||||| || || | || | | Sbjct 32648 TCAAACTCGTCGCCATAGACATCTGCCAGGCCGGGGGCTTCATTGGGGCAGAACAGAGTC 32707 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | || ||| || ||||| || |||||||| |||| |||||| || Sbjct 32708 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGCATAGAAC 32767 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || ||||| |||||| | ||| || | Sbjct 32768 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAAG 32827 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | ||||| || || || || || || | | | || || || ||||| ||||| Sbjct 32828 ACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCCT 32887 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||||||||||||||| || | || | | ||| |||| ||| || || || Sbjct 32888 TGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGAA 32947 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||| || || ||| ||| || || ||||| || || || || Sbjct 32948 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACCG 33007 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| | |||||| |||| |||||| ||||| || || Sbjct 33008 ATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTCG 33067 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || ||||| ||| |||| | | ||| || || || || || | || ||| || Sbjct 33068 ATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACCA 33127 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| |||| |||||||| ||||||||||| |||| | || | |||| ||| || Sbjct 33128 GCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 33187 Query 77060 TCAATAACTGCTTCTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACATAT 77117 ||||| | ||| |||| |||| ||||| || || || ||||||||||||| | Sbjct 33188 TCAATGGCCTTTTCGATAT--CATTACCGTGAATACCGACGGCAACACGCATCAACAAGT 33245 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 |||| || || || || ||| || ||| || |||||| || || | || | Sbjct 33246 GCTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTCT 33305 Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGT 77237 | || || ||| ||||||| ||||| | ||||| | |||| | || || || | | Sbjct 33306 TGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCAT 33365 Query 77238 CCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCA 77296 | || ||| | ||||| || ||| | | | || || ||||| | || | Sbjct 33366 CAGCATGTTTCATGACAATTTCATATGTCTCT-TTCGAGATCATTGGTGCCGGTTTCTTG 33424 Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTA-AATAGtttttttGT 77355 || || || || ||||||| | | ||| || || || | || | || || || Sbjct 33425 TTCTTGGGGTTGACATAGTGGTAGAGGTCCGAGATGAC-CAGCGAGAACTGCTTCTTGGT 33483 Query 77356 TTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || |||||| || || || |||||||| | ||||| || || ||||| ||||| || Sbjct 33484 TTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925016000960