Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq297 140 7e-28 seq71 86.0 1e-11 >seq297 Length=30052 Score = 140 bits (154), Expect = 7e-28 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||||||||| || ||||| ||||||||||||||||| | || || | ||||| Sbjct 4167 GAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGACAAGGTACGGCCATC 4226 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| ||||| || || || | |||||| || | | || || ||||| Sbjct 4227 TTCAAGTTGCTTT--CCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTA 4284 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| || |||||| | || | | |||||||| ||| || || | || ||| Sbjct 4285 TCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAACCTCTAATGTGATA 4344 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||||||||| ||||| | |||||| Sbjct 4345 GTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 Score = 107 bits (118), Expect = 4e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| ||||||||||||||||||| | || | ||| ||||| || || || ||||| Sbjct 3960 CTCCTTTTGGATGTTGTAATCGGAGAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAA 4019 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||||||||| | | || |||||||| ||||| || || || ||| | Sbjct 4020 GATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATT 4079 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | |||| || ||| || || || ||||| || || || ||||| ||||| || Sbjct 4080 GTCGATTGTGTCAGAGGACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGAC 4139 Query 152093 GAAGACCTGCAT 152104 ||||| |||||| Sbjct 4140 GAAGATCTGCAT 4151 Score = 102 bits (112), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| || || || || ||||||||||| |||| ||||| | || ||| Sbjct 4396 AGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCGTCT 4455 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||||||||| | | ||| || ||||| || Sbjct 4456 TCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 4515 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAG 152070 || || || |||||| | || | ||| ||| | || || |||||||| || | Sbjct 4516 TGGATCTTCGACTTGACATTATCAATTGTGTCGCTGGA--TTCCACCTCAAGAGTGATGG 4573 Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094 | ||||| ||||| ||||| |||| Sbjct 4574 TCTTGCCAGTGAGGGTCTTAACGA 4597 Score = 102 bits (112), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || |||||||| || || || |||||||| |||| | ||| | ||||| Sbjct 4701 AGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCC 4760 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | ||||||||| | | ||| || ||||| || Sbjct 4761 TCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 4820 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAG 152070 ||||| || |||||| | || | |||| || |||| || || | || || | Sbjct 4821 TGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCG--ACCTCTAAGGTGATGG 4878 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||||||||| ||||||| |||||| Sbjct 4879 TCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 4912 >seq71 Length=90593 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 |||||||| | ||||| ||||||| || ||||||||||| || | ||||| ||| Sbjct 32766 TTCTATGCTCTGTGGACTCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGGTGACTGG 32707 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | || || || |||||||||||||| || || | ||||| ||||| |||||||| Sbjct 32706 ACTCTGTTCTGCCCCAATGAAGCCCCCGGCCTGGCAGATGTCTATGGCGACGAGTTTGAT 32647 Query 115749 AATCTTTACGAA 115760 |||||| ||| Sbjct 32646 GCTCTTTATGAA 32635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805233154563