Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq297 170 1e-37 seq578 93.3 3e-14 >seq297 Length=30052 Score = 170 bits (188), Expect = 1e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || |||||||||||||||||||||||||||| ||| ||| |||| ||| Sbjct 3943 ACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAGAGGGTCCGCCCGTCTTCC 4002 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| |||| || | |||||||| || Sbjct 4003 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGG 4062 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | ||| || ||||||| ||||| |||||| Sbjct 4063 ATCTTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAACCTCCAGTGTAATGGTCTTT 4122 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||| ||||| Sbjct 4123 CCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 138 bits (152), Expect = 8e-28 Identities = 165/222 (74%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||||| || |||||||| |||| ||| ||| | || || Sbjct 4704 ACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCG 4763 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||||||||||||| || | ||| | || ||||| ||| Sbjct 4764 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGA 4823 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | || |||||| ||| || ||||| | || || |||| Sbjct 4824 ATCTTCGACTTGACATTGT--CAATAGTGTCGCTGGACTCGACCTCTAAGGTGATGGTCT 4881 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAATGA 44348 | || ||||| ||||| |||||||| ||||||||| | |||| Sbjct 4882 TGCCAGTGAGAGTCTTGACGAAGATCTGCATGATGAGGATGA 4923 Score = 125 bits (138), Expect = 5e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||||| ||||||||||| |||| | ||| |||| ||| Sbjct 4399 ACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCGTCTTCC 4458 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||| |||||||| || | ||| | ||| ||||| ||| Sbjct 4459 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 4518 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || |||||| |||||||||||| | || || ||||| Sbjct 4519 ATCTTCGACTTGACATTATCAATTGTGTCGCTGGATTCCACCTCAAGAGTGATGGTCTTG 4578 Query 44309 CCCGTGAGGGTCTTCACGA 44327 || ||||||||||| |||| Sbjct 4579 CCAGTGAGGGTCTTAACGA 4597 Score = 122 bits (134), Expect = 6e-23 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || || ||||| ||| ||||||||||||||||||||| | | || | || | || || Sbjct 4171 ACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGACAAGGTACGGC-CATCTTC 4229 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| |||||||| || | |||||||||||||| || | || ||||| ||| Sbjct 4230 AAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTG 4289 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||| | || || ||||| | || || ||| Sbjct 4290 AATCTTGCTCTTGACATTGT--CGATGGTGTCTGAAGACTCAACCTCTAATGTGATAGTC 4347 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| ||||| ||||| || ||||| Sbjct 4348 TTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 >seq578 Length=126255 Score = 93.3 bits (102), Expect = 3e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| ||| || ||| | || || |||||||| || || |||| Sbjct 60548 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 60489 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| |||||||| || | || | ||| ||||| ||| ||||| ||| | | Sbjct 60488 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 60429 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||||||||| || || || || | ||||| ||||| ||||| |||||||| |||| Sbjct 60428 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 60369 Query 44328 A 44328 | Sbjct 60368 A 60368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985780085701