Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq297 150 4e-31 seq578 111 4e-19 >seq297 Length=30052 Score = 150 bits (166), Expect = 4e-31 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || ||||| | ||||| || |||||| Sbjct 4376 CAGATTTTCGTTAAGACTCTCACCGGAAAGACTATCACATTAGAGGTTGAGTCTTCAGAC 4317 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||||||||| || || || || || || || ||||| Sbjct 4316 ACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAGCAG 4257 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || || || |||||||| || || |||||||| | || |||| | ||||| ||| | Sbjct 4256 CGTCTCATTTTTGCCGGAAAGCAACTTGAAGATGGCCGTAC-CTTGTCTGATTACAACAT 4198 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 |||||| || || ||||| |||||||| Sbjct 4197 CCAAAAGGAGTCCACACTTCATCTTGT 4171 Score = 136 bits (150), Expect = 1e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || |||||| | ||||| || | ||| Sbjct 4909 CAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTAGAGGTCGAGTCCAGCGAC 4850 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||||||||| || || || |||||||| |||||||| Sbjct 4849 ACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAGCAG 4790 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || |||||||| ||||| | ||||| |||| || ||| | Sbjct 4789 CGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAACATT 4730 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| || ||||| || ||| || Sbjct 4729 CAGAAGGAATCTACTCTGCACCTGGTTCTG 4700 >seq578 Length=126255 Score = 111 bits (122), Expect = 4e-19 Identities = 135/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 60367 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 60423 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 60424 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCG 60483 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 60484 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 60543 Query 178106 AAA 178108 || Sbjct 60544 GAA 60546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203714959785282