Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq297 147 2e-30 seq578 125 7e-24 seq611 111 1e-19 >seq297 Length=30052 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||||| || |||||||||||||| |||||||| Sbjct 4685 GCCACCACGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGA 4744 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| | || |||||||||||||| ||||| |||| ||||| ||||| | || Sbjct 4745 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGG 4804 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||| ||| ||| | || | | || | | | ||||||||| ||||| | Sbjct 4805 GATGCCCTCCTTATCC-TGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGA 4863 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 4864 CCTCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATG 4913 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||||| || || ||||||||||| || ||||| || |||||| Sbjct 3925 CCACCGCGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAG 3984 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| ||| |||| || |||||||| || ||||| || || ||||| ||||| | |||| Sbjct 3985 AGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 4044 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| ||| || |||| || | | | ||||| ||||| || Sbjct 4045 ATGCCTTCCTTGTCTTGGATCTTGCTCTTC-ACATTGTCGATTGTGTCAGAGGACTCAAC 4103 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 4104 CTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || |||||||| ||||| |||||||| Sbjct 4381 CCACCACGCAGACGAAGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 4440 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| |||| || |||||||| || ||||| ||||||||||| ||||| | || Sbjct 4441 AAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 4500 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| | | | | | |||||||| || ||||| Sbjct 4501 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCA-ATTGTGTCGCTGGATTCCAC 4559 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || || || ||||| |||| Sbjct 4560 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGA 4597 Score = 102 bits (112), Expect = 8e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| || ||| |||||| || ||||| || || || Sbjct 4153 CCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGAC 4212 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || | || || || ||||| ||||| || || || ||||| || || | |||| Sbjct 4213 AAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGA 4272 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||| ||| || || ||| || | ||| ||||| ||||| | Sbjct 4273 ATGCCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATG--GTGTCTGAAGACTCAA 4330 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| |||||||||||||| Sbjct 4331 CCTCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 >seq578 Length=126255 Score = 125 bits (138), Expect = 7e-24 Identities = 139/183 (76%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || || |||||||| || ||||| | Sbjct 60548 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 60489 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||| ||||| | ||| | | |||||||||| || | || || | ||| | Sbjct 60488 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTG 60430 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 60429 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 60370 Query 41852 AAA 41854 ||| Sbjct 60369 AAA 60367 >seq611 Length=248973 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || ||||| || ||||||||| ||||| ||||| ||| Sbjct 196820 CCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 196879 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| |||||||||||||| ||||| ||||| ||||| ||||| | ||| Sbjct 196880 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 196939 Query 41756 ACGCTCTCCTTGTC 41769 | | ||||||||| Sbjct 196940 ATTCCCTCCTTGTC 196953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462297914923600