Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234965.1_202017-07-28] 1,550 sequences; 29,964,440 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq885 185 1e-41 seq686 95.1 1e-14 >seq885 Length=263120 Score = 185 bits (204), Expect = 1e-41 Identities = 475/723 (66%), Gaps = 8/723 (1%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || | |||| ||| ||||| ||| | ||||| | || | | Sbjct 121769 TCAAACTCGTCGCCATAGACATCTGCCAGGCCAGGGGCTTCGTTGGGACAGAACAGAGTC 121828 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || |||| || ||||| ||||| || |||||||| |||| ||||| || Sbjct 121829 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 121888 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||| | || ||| |||||| || || ||||| |||||| | |||| | | Sbjct 121889 AGATCACGGGCTCTGATTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAACTCAAAG 121948 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||||| ||||| || || | ||| || | | | | ||||| || |||||||||||| Sbjct 121949 ACATCAGCGTGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTTCCTCCC 122008 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 122009 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 122068 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310 | ||| ||||| || || ||| || ||||||| || || ||||| Sbjct 122069 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACATTAAGACCG 122128 Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370 || || || || | || ||||| | || || || | || || ||||| || || Sbjct 122129 ATACCGCCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGTGTGTCGTAGATACCTTCA 122188 Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430 || ||||| ||| |||| | | || || || | || ||| | | ||| || Sbjct 122189 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTACCA 122248 Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490 ||||| || | ||||| ||||| || || || |||| | || | ||||| || ||| Sbjct 122249 GCATTGAACAGAGTAGGGGAAGCATGAGTGAAGTATTTCTGGGACATGAGATTATAGGTC 122308 Query 54491 TCGATAGCTGAGTCTATAT----CCCATTGATGAATTCCTACTGCGACACGCATTAACAT 54546 || ||| | || |||| || | |||| || || || |||||||| | || Sbjct 122309 TCAATAACCTTTTCGATATTTTCGCCGTGGATG----CCGACGGCAACACGCATCAGCAA 122364 Query 54547 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGT 54606 |||||| || | ||| | | |||| ||| ||| ||||| |||||| || | || Sbjct 122365 GTGCTGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGACCGCTCGAGTGT 122424 Query 54607 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTT 54666 || || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | Sbjct 122425 CTTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTC 122484 Query 54667 ATC 54669 ||| Sbjct 122485 ATC 122487 >seq686 Length=180023 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208 ||| || |||||||| | | || | |||||||| || ||||| || ||||| | || Sbjct 104494 GTGCAGCCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAATCC 104435 Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268 ||||| || ||||| || ||||| ||||| ||||| || ||||||||||| || || || Sbjct 104434 GCGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCGGAGAAGAAAATTCCCTCCACAGC 104375 Query 24269 CGCAAAGGCAATAAG 24283 || ||||| | ||| Sbjct 104374 GGCGAAGGCCACAAG 104360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593710096644000