Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234965.1_202017-07-28] 1,550 sequences; 29,964,440 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq790 127 2e-24 seq1085 100 3e-16 >seq790 Length=28454 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| ||| | ||||||||||| || || |||||||||| || || ||| | Sbjct 3931 ACGCAGCACCAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGCCC 3990 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3991 ATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTT 4050 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || || | ||| | | | ||||| || || || || | || | Sbjct 4051 GTCTTGGATCTTGCTCTTCA-CGTTGTCGATTGTGTCAGAGGACTCAACCTCCAGGGTAA 4109 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || ||||| |||||||| ||||| Sbjct 4110 TGGTCTTTCCGGTGAGTGTCTTGACAAAGATCTGCAT 4146 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| || || || | ||||| || | || || |||||||| |||||||| Sbjct 4717 CTCCTTCTGAATGTTATAGTCGGATAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 4776 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | ||||||||||| | || | | |||||| ||| ||| | || | |||| Sbjct 4777 AATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCC-TGAATCTTCGACTTGACAT 4835 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||||| || || || || | |||||||| |||||||| || ||||| | Sbjct 4836 TGTCAATAGTGTCGCTGGACTCGACCTCTAGGGTGATGGTCTTGCCCGTGAGAGTCTTGA 4895 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 4896 CGAAGATCTGCAT 4908 Score = 82.4 bits (90), Expect = 9e-11 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||| | |||| |||||||| || ||||| |||| || || || | || || || || Sbjct 4171 ATGGAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATCTTCAAGTTG 4230 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| || || || ||||| ||||||||||| | || | || |||||||| | ||| | | Sbjct 4231 CTTTCCGGCAAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGT-CTTGAATCT 4289 Query 43100 T--TGTTT-GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156 | | ||| | |||| | |||||| || || || || | || ||||| || || Sbjct 4290 TGCTCTTTACATTGTCG--ATCGTGTCAGAGGACTCAACCTCCAGGGTAATGGTCTTTCC 4347 Query 43157 CGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| || ||||| ||||| Sbjct 4348 AGTGAGTGTCTTGACGAAGATCTGCAT 4374 >seq1085 Length=114634 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 107239 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 107298 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | | |||||||||| ||| || |||| ||| | Sbjct 107299 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 107357 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 107358 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 107417 Query 43173 AA 43174 || Sbjct 107418 AA 107419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571806521034000