Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234965.1_202017-07-28] 1,550 sequences; 29,964,440 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq790 181 2e-40 seq1085 123 5e-23 seq652 113 8e-20 seq402 84.2 4e-11 >seq790 Length=28454 Score = 181 bits (200), Expect = 2e-40 Identities = 181/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 ||||| ||| ||||| || |||| |||| || || ||| ||| || |||||||| | Sbjct 3912 TTTAACATCCACCGCGCAGACGCAGCACCAGATGGAGAGTGCTCTCCTTCTGGATGTTGT 3971 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| ||||| || | ||||||||| | |||||| || ||||| ||||| | || |||| Sbjct 3972 AATCAGAGAGGGTGCGCCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGT 4031 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || |||||||| ||||||||||| ||||| ||| ||| ||||| ||||| | | Sbjct 4032 CTGGGGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGG 4091 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||| ||| ||||| ||||| ||||| |||||||| || |||||||| Sbjct 4092 ACTCAACCTCCAGGGTAATGGTCTTTCCGGTGAGTGTCTTGACAAAGATCTGCAT 4146 Score = 150 bits (166), Expect = 3e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| || ||||||||||| || || || | || | |||||||| | Sbjct 4167 CAAGATGGAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATCTTCAA 4226 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||| ||||| || ||||| | || ||||| || || ||||| ||||||||||||| Sbjct 4227 GTTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGAA 4286 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||| || ||||| ||||| | || || || |||| ||| ||||| |||| Sbjct 4287 TCTTGCTCTTTACATTGTCGATCGTGTCAGAGGACTCAACCTCCAGGGTAATGGTCTTTC 4346 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| ||||||||||| |||||||| Sbjct 4347 CAGTGAGTGTCTTGACGAAGATCTGCAT 4374 Score = 147 bits (162), Expect = 4e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||| ||| || || ||||| || || |||||||| ||||| Sbjct 4682 CCACCACGAAGACGGAGAACCAGGTGCAGAGTAGACTCCTTCTGAATGTTATAGTCGGAT 4741 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || ||||| || || Sbjct 4742 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCAGGAGGG 4801 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || ||||| || |||||||| | |||||| || || ||||| |||| | || || Sbjct 4802 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTGGACTCGAC 4860 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || |||||||| ||||||||||| |||||||| Sbjct 4861 CTCTAGGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATCTGCAT 4908 >seq1085 Length=114634 Score = 123 bits (136), Expect = 5e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 107241 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 107300 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || || || |||||||| || ||||| ||||||||| ||| Sbjct 107301 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 107360 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 107361 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 107419 >seq652 Length=194974 Score = 113 bits (124), Expect = 8e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 ||||| | |||||| || ||||| || ||| || || | |||||| || || Sbjct 188575 GCGTCCAAGTCGTGCTCAACGTAGACAGTCTTGACCTCGTCCTTCTTGGGGAAACCTTCA 188634 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 ||||| | || ||||| ||||| | ||| ||| |||| || | ||||| || |||| Sbjct 188635 AGCTGCTCGTTGGCAATGGCACGCATCAGAGTAGTCTTACCAGTACCGTTAGGTCCGAGA 188694 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || |||||| | | || ||||| | | || || |||||| ||||||||| || Sbjct 188695 AGACCGTAACGCTGACCACGCTTCAGGCGAAGAGAGGTCTGGTTCAGCAGGATCTTGGCA 188754 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||||||||| ||||| ||| | ||| || |||||||||||||| Sbjct 188755 CCATAGGCAAGAGAGAAGGTGCAGTTGCAGAGATCCTCACCCTCCTC 188801 >seq402 Length=72774 Score = 84.2 bits (92), Expect = 4e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 225533 ACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCG 225592 || |||| ||||| || ||||||||||| |||| | ||| || | ||||| || || Sbjct 19339 ACATCCAGATGGTTAGTCGGTTCGTCCAGGAGCAACACGTCGGCCTTCATGAGCATAGCA 19280 Query 225593 CGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGA 225638 || | |||| ||||||||| ||||| || ||||| |||||||||| Sbjct 19279 CGGGCCAGAGCCAGCTTCATCTTCCAACCACCGGAGAGGGAGCCGA 19234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921604543566000