Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234965.1_202017-07-28] 1,550 sequences; 29,964,440 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq790 104 2e-16 seq904 93.3 3e-13 seq641 87.8 1e-11 seq1363 86.0 5e-11 >seq790 Length=28454 Score = 104 bits (114), Expect = 2e-16 Identities = 159/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| |||||||| || || ||| ||||| || ||||| |||| | || | Sbjct 4157 AGACGGAGGACAAGATGGAGTGTGGATTCCTTTTGG--ATGTTGTAGTCAGACAAGGTAC 4214 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||||||||| |||||||||||||| || | ||||| |||||||| || || | Sbjct 4215 GGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCT 4274 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433 | || |||||||| || ||||| || || || |||| | || | | || || Sbjct 4275 CCTTGTCTTGAATCTTGCTCTTTACATTGTCGATCGTGTCAGAG-GACTCAACCTCCAGG 4333 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| || || ||||| || || || ||||| || |||||| Sbjct 4334 GTAATGGTCTTTCCAGTGAGTGTCTTGACGAAGATCTGCATA 4375 >seq904 Length=14011 Score = 93.3 bits (102), Expect = 3e-13 Identities = 109/146 (75%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 550386 AAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444 |||||| || | | || || || ||||| ||||| ||||| || || |||||||| Sbjct 3211 AAGAAGGTTGAGAAGGCTGTCATCACTGTGCCAGCTTATTTCAACGATAATCAACGTCAG 3152 Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 || || || |||||||| ||||| || | |||||||||||||| || || || || Sbjct 3151 GCGACGAAGGATGCTGGTGCCATTGCCGGTTTGAATGTTCTTCGTATCATAAACGAGCCC 3092 Query 550505 ACTGCTGCTGCACTTGCATATGGACT 550530 ||||||||||| | || |||||||| Sbjct 3091 ACTGCTGCTGCTATCGCCTATGGACT 3066 >seq641 Length=197423 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || ||||| || ||||| || ||||| ||||| || || || || | || Sbjct 29784 ACTGTCCCCGCTTATTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGTCAGATC 29725 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || || ||||| ||| || | || || ||||||||||| || ||||| || || Sbjct 29724 GCTGGTCTGAACGTTCTCCGTGTTGTTAACGAGCCTACTGCTGCCGCCCTTGCCTACGGT 29665 Query 550529 CTTGATAA 550536 || || || Sbjct 29664 CTGGAGAA 29657 >seq1363 Length=97476 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 390856 TTTCTTACGGTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTT 390915 ||||| || ||||||||||||| || | | ||||| || || || | |||| Sbjct 37223 TTTCTGACAGTACCATCATACTTAACCATGACCTCTTCCAAGGCCTTGACCAGCTTTCGC 37164 Query 390916 TGGATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCC 390975 |||||||||||||| || ||||| || | ||||||| || | |||||||| || ||| Sbjct 37163 TGGATATAACCAGTCTCGGCAGTCTTGACAGCAGTATCGATCAAACCTTCTCGACCGGCC 37104 Query 390976 ATAACTTGGAAGAAAAATTC 390995 || | |||||||| ||||| Sbjct 37103 ATGGCATGGAAGAAGAATTC 37084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029214029009500