Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234965.1_202017-07-28]
1,550 sequences; 29,964,440 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq790 104 2e-16
seq904 93.3 3e-13
seq641 87.8 1e-11
seq1363 86.0 5e-11
>seq790
Length=28454
Score = 104 bits (114), Expect = 2e-16
Identities = 159/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| |||||||| || || ||| ||||| || ||||| |||| | || |
Sbjct 4157 AGACGGAGGACAAGATGGAGTGTGGATTCCTTTTGG--ATGTTGTAGTCAGACAAGGTAC 4214
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
|||||||||||| |||||||||||||| || | ||||| |||||||| || || |
Sbjct 4215 GGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCT 4274
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433
| || |||||||| || ||||| || || || |||| | || | | || ||
Sbjct 4275 CCTTGTCTTGAATCTTGCTCTTTACATTGTCGATCGTGTCAGAG-GACTCAACCTCCAGG 4333
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|||| || || ||||| || || || ||||| || ||||||
Sbjct 4334 GTAATGGTCTTTCCAGTGAGTGTCTTGACGAAGATCTGCATA 4375
>seq904
Length=14011
Score = 93.3 bits (102), Expect = 3e-13
Identities = 109/146 (75%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 550386 AAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444
|||||| || | | || || || ||||| ||||| ||||| || || ||||||||
Sbjct 3211 AAGAAGGTTGAGAAGGCTGTCATCACTGTGCCAGCTTATTTCAACGATAATCAACGTCAG 3152
Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504
|| || || |||||||| ||||| || | |||||||||||||| || || || ||
Sbjct 3151 GCGACGAAGGATGCTGGTGCCATTGCCGGTTTGAATGTTCTTCGTATCATAAACGAGCCC 3092
Query 550505 ACTGCTGCTGCACTTGCATATGGACT 550530
||||||||||| | || ||||||||
Sbjct 3091 ACTGCTGCTGCTATCGCCTATGGACT 3066
>seq641
Length=197423
Score = 87.8 bits (96), Expect = 1e-11
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || ||||| || ||||| || ||||| ||||| || || || || | ||
Sbjct 29784 ACTGTCCCCGCTTATTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGTCAGATC 29725
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
||||| || || ||||| ||| || | || || ||||||||||| || ||||| || ||
Sbjct 29724 GCTGGTCTGAACGTTCTCCGTGTTGTTAACGAGCCTACTGCTGCCGCCCTTGCCTACGGT 29665
Query 550529 CTTGATAA 550536
|| || ||
Sbjct 29664 CTGGAGAA 29657
>seq1363
Length=97476
Score = 86.0 bits (94), Expect = 5e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 390856 TTTCTTACGGTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTT 390915
||||| || ||||||||||||| || | | ||||| || || || | ||||
Sbjct 37223 TTTCTGACAGTACCATCATACTTAACCATGACCTCTTCCAAGGCCTTGACCAGCTTTCGC 37164
Query 390916 TGGATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCC 390975
|||||||||||||| || ||||| || | ||||||| || | |||||||| || |||
Sbjct 37163 TGGATATAACCAGTCTCGGCAGTCTTGACAGCAGTATCGATCAAACCTTCTCGACCGGCC 37104
Query 390976 ATAACTTGGAAGAAAAATTC 390995
|| | |||||||| |||||
Sbjct 37103 ATGGCATGGAAGAAGAATTC 37084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029214029009500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |