Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234965.1_202017-07-28] 1,550 sequences; 29,964,440 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq790 125 5e-23 >seq790 Length=28454 Score = 125 bits (138), Expect = 5e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| |||||||| ||||| ||| || | || || |||| | || Sbjct 4153 ACGCAGACGGAGGACAAGATGGAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGT 4212 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||||||||||||||| |||||||| ||||| || || |||||||| || || Sbjct 4213 ACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCAGGAGGGATGCC 4272 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||||||||||| || ||| || || || |||| | | || || Sbjct 4273 CTCCTTGTCTTGAATCTTGCTCTTTACATTGTCGATCGTGTCAGAGGACTCAACCTCCAG 4332 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || ||||| ||||| ||||| || || Sbjct 4333 GGTAATGGTCTTTCCAGTGAGTGTCTTGACGAAGATCTG 4371 Score = 111 bits (122), Expect = 1e-18 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || || || || ||| || || || ||||| || | |||||| Sbjct 4687 ACGAAGACGGAGAACCAGGTGCAGAGTAGACTCCTTCTGAATGTTATAGTCGGATAGAGT 4746 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| ||||| ||||| ||||| ||||| | ||| || || |||||||| || || Sbjct 4747 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCAGGAGGGATACC 4806 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||| || |||||||| |||||| |||||||| || || || || Sbjct 4807 CTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCTAG 4866 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || ||||||||||| ||||| || || Sbjct 4867 GGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATCTG 4905 Score = 100 bits (110), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || || ||||| || ||| || | || || || | | ||| Sbjct 4381 ACGCAGACGGAGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGT 4440 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| ||||| ||||| || || || |||||||||||||| || Sbjct 4441 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGATCAGGAGGAATACC 4500 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| || ||||| |||||| ||||| ||||| || | ||||| Sbjct 4501 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTATCGCTGGATTCCACCTCAAG 4560 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAAC 480760 ||| || || || |||||||| ||||| || Sbjct 4561 GGTGATGGTCTTGCCGGTGAGCGTCTTGAC 4590 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || ||||| || || || || || | || ||||||| || || Sbjct 3926 CGCAGACGCAGCACCAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGGGTG 3985 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | |||||| || ||||| ||||| || || ||||| || || || || ||||| || Sbjct 3986 CGCCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCC 4045 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||| ||||| || || || || || |||| | | || ||| Sbjct 4046 TCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGGACTCAACCTCCAGG 4105 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || |||||||| ||||| || || || || Sbjct 4106 GTAATGGTCTTTCCGGTGAGTGTCTTGACAAAGATCTG 4143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268112712979400