Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234965.1_202017-07-28]
1,550 sequences; 29,964,440 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq790 87.8 1e-12
>seq790
Length=28454
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || | || ||||||||||| ||| || ||| || || || ||||| ||||| |
Sbjct 3919 TCCACCGCGCAGACGCAGCACCAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 3978
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| |||||| ||| || || || || ||||| | || | | ||||| || || ||
Sbjct 3979 GAGGGTGCGCCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGG 4038
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||| ||||| |||||||| | || || || | || | |||||||| || ||
Sbjct 4039 AATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGGACTCAAC 4098
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || | || || ||||| ||||||||
Sbjct 4099 CTCCAGGGTAATGGTCTTTCCGGTGAGTGTCTTGACAAAGATCTGCAT 4146
Score = 82.4 bits (90), Expect = 6e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||| || || || || || || ||||||||||| || | | |||||
Sbjct 4693 ACGGAGAACCAGGTGCAGAGTAGACTCCTTCTGAATGTTATAGTCGGATAGAGTGCGGCC 4752
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || |||||||| | ||||| | ||||| || || || |||||||| ||
Sbjct 4753 ATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTT 4812
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | |||||| | || | |||||| || || || || || |
Sbjct 4813 ATCCTG-AATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCTAGGGTGA 4871
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || | || || || || ||||||||
Sbjct 4872 TGGTCTTGCCCGTGAGAGTCTTGACGAAGATCTGCAT 4908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385211922968550
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |