Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234975.1_202017-07-28] 1,508 sequences; 29,227,124 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq923 122 8e-23 seq1154 100 2e-16 seq47 86.0 5e-12 >seq923 Length=11914 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||||| ||||| || ||| || || ||||||||||| Sbjct 3919 CCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 3978 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| ||| || ||||| || |||||| |||||||||||||||| || || || Sbjct 3979 AGGGTGCGCCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 4038 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||||||||||||| || || || || | |||| ||||| | | ||| ||| Sbjct 4039 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGGACTCAACC 4098 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | || || || || || || || ||||| |||||||| Sbjct 4099 TCCAGGGTAATGGTCTTTCCAGTGAGTGTCTTGACAAAGATCTGCAT 4145 Score = 114 bits (126), Expect = 1e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| ||| || || ||||| |||||||| || || || || ||| || | Sbjct 4166 CAAGATGGAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATCTTCAA 4225 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 | || ||||| || | |||||||||||||| || ||||| ||||||||||||||| | Sbjct 4226 GTTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGA 4285 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| ||||| | | ||| ||||| | ||| | || || | Sbjct 4286 TCTTGCTCTTCACGTTGTCGATTGTGTCAGAGGACTCAACCTCCAGGGTAATAGTCTTTC 4345 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||||||| || || ||||||||||| Sbjct 4346 CAGTCAGAGTCTTAACGAAAATCTGCAT 4373 Score = 98.7 bits (108), Expect = 9e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || |||||||| ||| || |||||| |||||||||||| || ||| Sbjct 4405 GTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTGCCA 4464 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || ||||||||||| ||||| || ||||||||||| || || || Sbjct 4465 GCGAAAATCAGGCGCTGCTGATCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 4524 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||| || || || ||||| | ||| | || |||||||| || || Sbjct 4525 ACATTATCAATGGTATCGCTGGATTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGCGTC 4584 Query 118722 TTTACAA 118728 || |||| Sbjct 4585 TTGACAA 4591 >seq1154 Length=101441 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||| ||||| || |||||| |||| Sbjct 39365 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 39306 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || || || || ||||||||||| || || || || | ||| Sbjct 39305 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 39246 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | |||||| |||| ||| | || || || ||||| || || || ||| Sbjct 39245 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 39186 >seq47 Length=80304 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | || || ||||| Sbjct 64660 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCGTCCTC 64719 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct 64720 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCTGT 64779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433822426739536