Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234975.1_202017-07-28]
1,508 sequences; 29,227,124 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1332 129 9e-25
>seq1332
Length=92052
Score = 129 bits (142), Expect = 9e-25
Identities = 203/289 (70%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| |||||||||| || || | |||||||| ||||| | ||| ||| | |||||
Sbjct 48450 ATTTGGCAAATGTACAAGAAAGCCGAAGCCTCCTTCTGGACCGCCGAGGAGATTGATCTC 48509
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||| || || |||| ||| | | || ||| ||| ||||| | || || ||
Sbjct 48510 TCCAAAGATCTTCACGACTGGAACAACCGCCTGAATGACGACGAGCGTTACTTCATCTCT 48569
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| | | |||||||| || | || || ||||||||||| || || ||| || ||
Sbjct 48570 CATGTCCTTGCCTTCTTCGCTGCATCTGACGGAATCGTCAATGAGAACCTGCTGGAGCGC 48629
Query 125199 TTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
||| | ||| | ||| | || |||| |||||| ||||| ||||| |||||||
Sbjct 48630 TTCAGCAATGAG--GTCCAGGTGCCTGAGGCTCGGTGCTTCTACGGCTTCCAGATCATGA 48687
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|||||||| | || ||||| | ||||| |||||||| | |||||
Sbjct 48688 TTGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACAT 48736
Score = 118 bits (130), Expect = 2e-21
Identities = 327/495 (66%), Gaps = 21/495 (4%)
Strand=Plus/Plus
Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426
|| ||||| ||||||| || | |||||| || | | ||| | | ||| | |
Sbjct 48850 AAGAAGGCCCAATGGGCCATGAGATGGATCTCGGATAAGGAATCTACTTTTGCCCAGCGT 48909
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| ||||| |||||||| || ||||| || ||||| || || |||||| |||||||
Sbjct 48910 CTTGTGGCCTTCGCCGCTGTGGAGGGAATTTTCTTCTCCGGATCTTTTGCTTCCATCTTC 48969
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||||| |||||||||||| | ||||| || || || | |||||| | || |||||
Sbjct 48970 TGGCTGAAGAAGCGCGGATTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGT 49029
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603
|||||||| || ||| |||||||| || ||||| || || | | | || |||
Sbjct 49030 GACGAGGGGCTGCACACGGACTTTGCTTGCCTTCTGTTCTCTCACTTGAACCATCGCCCC 49089
Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663
|| ||| || | || ||| |||| | || || || ||| || |||
Sbjct 49090 GA--CAAGA---AG-GTTGTTGAGGATATCATCCTT------GAGGCTGTGGCCATCGAA 49137
Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATG 125723
|| ||||| | || || | || || ||| | | |||||||||| ||||| |||
Sbjct 49138 CAGGAGTTCTTGACAGACGCTCTTCCTGTCGCTCTCCTCGGCATGAACTCTAAGCTGATG 49197
Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA-- 125781
||| ||||||| ||||| || || || || ||||| | | || |||||
Sbjct 49198 TGCCAGTACATTGAGTTCGTTGCTGACCG---ACTGTTGGTCGCTCTCGGAAACAAGAAG 49254
Query 125782 -TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840
|||||| | || || || || |||||| || || || || | || ||||||
Sbjct 49255 TACTACAACTCTCCCAACCCGTTCGACTTCATGGAAAGTATTTCGCTTGCAGGAAAGACC 49314
Query 125841 AACTTTTTCGAGAAG 125855
||||| || ||||||
Sbjct 49315 AACTTCTTTGAGAAG 49329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741045231034080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |