Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234975.1_202017-07-28] 1,508 sequences; 29,227,124 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq446 206 3e-48 >seq446 Length=175318 Score = 206 bits (228), Expect = 3e-48 Identities = 591/901 (66%), Gaps = 16/901 (2%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || |||||||| || | |||| ||| ||||| ||| | ||||| | || | | Sbjct 141581 TCAAACTCGTCGCCATAGACATCTGCCAGGCCAGGGGCTTCGTTGGGACAGAACAGAGTC 141522 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || |||| || ||||| ||||| || |||||||| |||| ||||| || Sbjct 141521 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 141462 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 ||||| | || ||| |||||| || || ||||| |||||| | |||| | | Sbjct 141461 AGATCACGGGCTCTGATTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAACTCAAAG 141402 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||||| ||||| || || | ||| || || | | | ||||| || |||||||||||| Sbjct 141401 ACATCAGCGTGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTTCCTCCC 141342 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||||| || ||||| || | || | | ||| |||| ||||||||| || Sbjct 141341 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 141282 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497 ||| ||||| || || ||| || ||||||| || || ||||| Sbjct 141281 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACATTAAGACCG 141222 Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557 || || || || | || ||||| | || || || | ||||| |||||||| || Sbjct 141221 ATACCGCCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGTGTGTCGTAGATACCTTCA 141162 Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617 |||||||| || |||| | | || || || | || ||| | | ||| || Sbjct 141161 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTACCA 141102 Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677 ||||| || | ||||| ||||| || || || |||| | || | ||||| || ||| Sbjct 141101 GCATTGAACAGAGTAGGGGAAGCATGAGTGAAGTATTTCTGGGACATGAGATTATAGGTC 141042 Query 63678 TCAATAGCTGAGTCTATAT----CCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63733 |||||| | || |||| || | |||| || || || |||||||| | || Sbjct 141041 TCAATAACCTTTTCGATATTTTCGCCGTGGATG----CCGACGGCAACACGCATCAGCAA 140986 Query 63734 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63793 |||||| || | ||| | | |||| ||| ||| || || |||||| || | || Sbjct 140985 GTGCTGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGACCGCTCGAGTGT 140926 Query 63794 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 63853 || || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | Sbjct 140925 CTTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTC 140866 Query 63854 ATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTC 63911 ||| || ||| | || || | ||| | | ||| || || || || | ||| Sbjct 140865 ATCAGCATGTTTCATGACAAT-TTCAT-ACGTTTCTTTCGAGATCATTGGGGCCGGTTGT 140808 Query 63912 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGttttt 63969 || || || || ||||||| | | | |||| || || || | | || | || | Sbjct 140807 TTGTTCTTGGGGTTGACATAGTGGTAGAGATCCGAGATGAC--CAGCGAGAACTGCTTCT 140750 Query 63970 ttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGAT 64029 | |||| |||||| || || || |||||||| | ||| || || || |||||||| || | Sbjct 140749 TGGTTTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATAGCATAATCGGGGT 140690 Query 64030 G 64030 | Sbjct 140689 G 140689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622935457445280