Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234975.1_202017-07-28] 1,508 sequences; 29,227,124 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1332 93.3 5e-14 >seq1332 Length=92052 Score = 93.3 bits (102), Expect = 5e-14 Identities = 193/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| || | ||| || || | || ||||| | ||||| || || ||| Sbjct 48736 ATGTATGTATCAATCAGCAGGGAGTATGTCTCCGAATGAATGTTCTCAATCATGATCTGG 48677 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| || | ||| || | | ||| || || | || | ||| | || Sbjct 48676 AAGCCGTAGAAGCACCGAGCCTCAGGCACCTGGACCTCATTGCTGAAGCGCTCCAGCAGG 48617 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| || || || ||||| || || || || | | ||| || || | Sbjct 48616 TTCTCATTGACGATTCCGTCAGATGCAGCGAAGAAGGCAAGGACATGAGAGATGAAGTAA 48557 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| || || || | | || | ||| ||| |||||||| || ||||| | || Sbjct 48556 CGCTCGTCGTCATTCAGGCGGTTGTTCCAGTCGTGAAGATCTTTGGAGAGATCAATCTCC 48497 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| | ||||| || || ||||| ||||| |||||||| | ||| || Sbjct 48496 TCGGCGGTCCAGAAGGAGGCTTCGGCTTTCTTGTACATTTGCCAAAT 48450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556850303173920