Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20turcosus_20[genbank_20GCA_5F002234975.1_202017-07-28] 1,508 sequences; 29,227,124 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq923 140 8e-28 seq765 116 9e-21 seq1154 102 2e-16 >seq923 Length=11914 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| |||||||| ||||||| ||||| || | ||| || | |||||| Sbjct 4162 AGGACAAGATGGAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATCT 4221 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || || || || || || ||||| || || || || ||||||||| Sbjct 4222 TCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCT 4281 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| |||| || || || | || || ||| Sbjct 4282 TGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGGACTCAACCTCCAGGGTAATAGTC 4341 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| ||| || | ||| | ||||| Sbjct 4342 TTTCCAGTCAGAGTCTTAACGAAAATCTGCAT 4373 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || |||||||||||| || || |||| |||||||| | | || Sbjct 3925 CGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGGGTG 3984 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||||||| |||||||| ||||||||||| || || || ||||| || ||||| || Sbjct 3985 CGCCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCC 4044 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| |||||| ||||| ||||| |||| || || || | Sbjct 4045 TCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGGACTCAACCTCCAGG 4104 Query 225673 GTGATCGTCTTGCCCGT 225689 || || ||||| || || Sbjct 4105 GTAATGGTCTTTCCAGT 4121 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || ||||| ||||| || || || || | || || |||| | ||| Sbjct 4686 ACGAAGACGGAGAACCAGGTGCAGAGTAGACTCCTTCTGAATGTTATAGTCGGATAGAGT 4745 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||| || | || || ||||| || || ||||| Sbjct 4746 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCAGGAGGGATACC 4805 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||| ||| || || ||||| || || || |||| Sbjct 4806 CTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCTAG 4865 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | ||| || | ||| | ||||| Sbjct 4866 AGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATCTGCAT 4907 >seq765 Length=27422 Score = 116 bits (128), Expect = 9e-21 Identities = 191/273 (70%), Gaps = 3/273 (1%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| ||||| |||| || || ||| | ||||||| ||||||| | || Sbjct 7158 ACTTTATACTTAATCTTTGCATTATTCTCAGGTTTATTAGGTACAGCATTTTCTGTACTT 7099 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 ||||| ||||||||| | | || ||| |||| ||| | | | ||| |||| | ||| Sbjct 7098 ATAAGATTAGAATTATCAGGACCTGGTGTTCAA-TAT--ATTTCTGATAACCAATTATAC 7042 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||| ||||| || || || || | ||||||||||| | |||||||| | | | Sbjct 7041 AATAGTATAATTACAGCCCACGCGATTATGATGATTTTCTTCATGGTTATGCCTGCTTTA 6982 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 || || ||||| || |||| || | || ||| | | || | ||| |||||||| || Sbjct 6981 ATTGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTAGGAGGTCCGGATATGGCATTC 6922 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || || || |||||||||||| || Sbjct 6921 CCCAGATTAAATAACATTAGTTTTTGATTATTA 6889 >seq1154 Length=101441 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| ||||||||||| Sbjct 39365 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 39306 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || || ||||| |||||||| |||||||| ||| || ||| Sbjct 39305 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 39246 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 39245 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 39187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192508158806552