Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq40 206 3e-48 >seq40 Length=974685 Score = 206 bits (228), Expect = 3e-48 Identities = 585/895 (65%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || |||||| ||| ||||| ||||| ||||| | || | | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || |||| || ||||| ||||| || |||||||| |||| ||||| || Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||| | || ||| |||||| || || |||||| |||||| | |||| | | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||| | ||||| || || | ||| || | | | | ||||| || |||||||||||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310 | ||| ||||| || || ||| || ||||||| || || ||||| Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194 Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370 || || || || | || ||||| | || || || | || || ||||| || || Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134 Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430 || ||||| ||| |||| | | || || || | || ||| | | ||| || Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074 Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490 ||||| || | |||||||| || || || || |||| | || | |||| ||| ||| Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014 Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550 || || || || || | ||||| || || || |||||||| |||| |||| Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGC 722954 Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610 || || | ||| | | |||| ||| ||| ||||| |||||| || | || || Sbjct 722953 TGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTG 722894 Query 54611 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCC 54670 || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | ||| Sbjct 722893 AAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATCG 722834 Query 54671 TTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 54730 || ||| | || | || || | || || || || | ||| | || Sbjct 722833 GCATGTTTCATGACAATTTCATACGTCTCTTTCGATATCATTGGCGCGGGTTGCTTGTTC 722774 Query 54731 TTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCA-CTA-AATAGtttttttGTTT 54788 || || |||||||||| || | ||| || || || | | || | || || |||| Sbjct 722773 TTGGGGTTGACATAGTGGAAGAGATCTGAGATGAC--CAGCGAGAACTGCTTCTTGGTTT 722716 Query 54789 CTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||||| || || || |||||||| | || ||||| ||||||||||| || || Sbjct 722715 GCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593713963255920