Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq27 168 7e-37 seq38 125 7e-24 seq160 123 3e-23 seq65 105 7e-18 >seq27 Length=857455 Score = 168 bits (186), Expect = 7e-37 Identities = 192/257 (75%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || ||||| || || |||||||||| ||||||| | || || Sbjct 683254 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 683195 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || || | ||||||| | ||| | || ||| | ||||| | |||||| Sbjct 683194 TCTAAAGATCTGCACGACTGGAACAACCGCCTAAATGACGATGAGCGTTACTTCATCTCT 683135 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| ||||| ||| ||||| |||||||| ||||| ||| | |||||| Sbjct 683134 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTCAATGAGAACCTGCTGGAGCGT 683075 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | |||||||||||| | ||||| ||||||||||||||||| |||||| || Sbjct 683074 TTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGGTGCTTCTACGGCTTCCAGATCATGATT 683015 Query 116873 GAGAACGTGCACTCGGA 116889 |||||| | || ||||| Sbjct 683014 GAGAACATTCATTCGGA 682998 Score = 161 bits (178), Expect = 1e-34 Identities = 300/438 (68%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||| ||||||| || |||||| | | | || | | |||| | |||| | Sbjct 682855 AGAAGGCCCAGTGGGCCATGACCTGGATTTCGGATAAGGAATCTACTTTCGCCCAGCGTC 682796 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | ||||||||||| || || ||||| ||||||| || || ||| || |||| || | Sbjct 682795 TTGTGGCCTTCGCTGCTGTGGAGGGAATCTTCTTCTCTGGATCTTTTGCTTCCATCTTCT 682736 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || || | ||||| || || |||||| ||||||||||||||| | | Sbjct 682735 GGCTGAAGAAGCGTGGATTGATGCCGGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 682676 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||| ||||| ||||||||||| | |||||| ||| || || || || Sbjct 682675 ACGAGGGACTGCACACTGACTTTGCCTGCCTTCTGTTCTCGCACTTAAACCATCGCCCCG 682616 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | | | || ||| ||| || || || || |||||||| ||| ||| | | Sbjct 682615 ACAAGAAGGTTGTTGAGGATATCATCGTTGAGGCTGTGGCCATCGAACAGGAGTTCTTGA 682556 Query 117282 CCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATC 117340 | || || || || || | || ||||| | || | | || | ||||| || ||||| Sbjct 682555 CAGACGCTCTTCCTGTCGGCCTCCTGGGCATGAACT-CTAAGCTGATGTGCCAGTACATT 682497 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400 |||||||| || ||| ||||| || ||| || | | ||| |||||||| | || Sbjct 682496 GAGTTCGTTGCTGACCGGCTGTTGGTCGCCCTCGGAAACAAGAAGTACTACAACTCTCCA 682437 Query 117401 AACCCGCTGGACTTTATG 117418 ||||| | ||||| ||| Sbjct 682436 AACCCCTTCGACTTCATG 682419 >seq38 Length=883156 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||||||||| ||||||||| | || ||||| ||| | Sbjct 701608 ATGCAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 701549 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || |||| || || ||||||||||| | |||||| Sbjct 701548 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 701489 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||| || || |||||||| |||| ||||| | |||||||||| Sbjct 701488 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAAC 701429 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || || ||||| | || || || || || Sbjct 701428 ATTCAAAAGGAATCGACTCTTCACCTCGT 701400 >seq160 Length=150305 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| ||||||| || | | ||||| | | Sbjct 102020 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 102079 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | |||||| || || | ||||| ||||| |||||| | |||||||| || || Sbjct 102080 GACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTG 102139 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||||| || || | |||||||| | ||||||||||||||||||| Sbjct 102140 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 102199 Query 40879 G 40879 | Sbjct 102200 G 102200 >seq65 Length=534987 Score = 105 bits (116), Expect = 7e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || ||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 174255 GACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 174196 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || ||||| ||||||||||||||||||||| | || ||||| || ||| | Sbjct 174195 GACGGCCGTACCCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 174136 Query 40903 CGCTTGAGGGGCGGCGGC 40920 ||| || | || || ||| Sbjct 174135 CGCCTGCGTGGTGGTGGC 174118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515212572993040