Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq38 116 3e-21 seq160 95.1 1e-14 seq663 87.8 2e-12 seq65 86.0 5e-12 >seq38 Length=883156 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || |||||||||||||| ||| || |||||| ||||| ||||| || ||| Sbjct 701412 GTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCA 701471 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || |||||||| || ||||| ||||||||||| || ||| || || Sbjct 701472 GCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTG 701531 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||||||||| | ||| | || ||||| || ||||| Sbjct 701532 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 701591 Query 118722 TTTACAAAAATCTGCATGG 118740 || || || || ||||||| Sbjct 701592 TTGACGAAGATTTGCATGG 701610 Score = 114 bits (126), Expect = 1e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| || | ||| || || ||||||||||||||||| || || || ||| || | Sbjct 701173 CAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAA 701232 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 | || |||||||| ||||||||||||| ||||||||||| || |||||||| || || Sbjct 701233 GTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAA 701292 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| |||||| | |||||| || | || | || || | Sbjct 701293 TCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTC 701352 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||||| || || ||||| ||||| Sbjct 701353 CGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||||| ||||| || ||| || ||||||||||||||| Sbjct 700926 CCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAG 700985 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | | ||| || | ||| || |||||| |||||||||||||||| || || || Sbjct 700986 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 701045 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||||||| || || || || | |||| || || | | ||| ||| Sbjct 701046 ATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACC 701105 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || ||||| || || || || || |||||||| Sbjct 701106 TCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 >seq160 Length=150305 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||| ||||| || |||||| |||| Sbjct 102198 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 102139 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || || || || ||||||||||| || || || || | ||| Sbjct 102138 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 102079 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | ||| || |||| ||| | || || || ||||| || || || ||| Sbjct 102078 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 102019 >seq663 Length=274 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | ||||| || || |||||||| || ||| | |||||| ||||||| Sbjct 159 ACCAGGTGCAGGGTAGATTCCTTCTGAATGTTATAGTCGGAGAGAGTGCGGCCATCCTCG 218 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| || |||||| | || | |||||||| || ||||| ||||||||||| || Sbjct 219 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 274 >seq65 Length=534987 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | || || ||||| Sbjct 174139 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCGTCCTC 174198 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct 174199 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCTGT 174258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433824959360068