Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq38 116 3e-21
seq160 95.1 1e-14
seq663 87.8 2e-12
seq65 86.0 5e-12
>seq38
Length=883156
Score = 116 bits (128), Expect = 3e-21
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || |||||||||||||| ||| || |||||| ||||| ||||| || |||
Sbjct 701412 GTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCA 701471
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || |||||||| || ||||| ||||||||||| || ||| || ||
Sbjct 701472 GCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTG 701531
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||||||||| | ||| | || ||||| || |||||
Sbjct 701532 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 701591
Query 118722 TTTACAAAAATCTGCATGG 118740
|| || || || |||||||
Sbjct 701592 TTGACGAAGATTTGCATGG 701610
Score = 114 bits (126), Expect = 1e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| || | ||| || || ||||||||||||||||| || || || ||| || |
Sbjct 701173 CAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAA 701232
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
| || |||||||| ||||||||||||| ||||||||||| || |||||||| || ||
Sbjct 701233 GTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAA 701292
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| |||||| | |||||| || | || | || || |
Sbjct 701293 TCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTC 701352
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| ||||| || || ||||| |||||
Sbjct 701353 CGGTAAGAGTCTTCACGAAAATTTGCAT 701380
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| ||||| | | || ||||| ||||| || ||| || |||||||||||||||
Sbjct 700926 CCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAG 700985
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || | | ||| || | ||| || |||||| |||||||||||||||| || || ||
Sbjct 700986 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 701045
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||||||| || || || || | |||| || || | | ||| |||
Sbjct 701046 ATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACC 701105
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || || ||||| || || || || || ||||||||
Sbjct 701106 TCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152
>seq160
Length=150305
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| ||||| |||||| ||||| || |||||| ||||
Sbjct 102198 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 102139
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| || || || || ||||||||||| || || || || | |||
Sbjct 102138 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 102079
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||| | ||| || |||| ||| | || || || ||||| || || || |||
Sbjct 102078 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 102019
>seq663
Length=274
Score = 87.8 bits (96), Expect = 2e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | ||||| || || |||||||| || ||| | |||||| |||||||
Sbjct 159 ACCAGGTGCAGGGTAGATTCCTTCTGAATGTTATAGTCGGAGAGAGTGCGGCCATCCTCG 218
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| || |||||| | || | |||||||| || ||||| ||||||||||| ||
Sbjct 219 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 274
>seq65
Length=534987
Score = 86.0 bits (94), Expect = 5e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || || |||||||| || | || || |||||
Sbjct 174139 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCGTCCTC 174198
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| |||| ||||||||||| ||||| || || ||||||||||||||
Sbjct 174199 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCTGT 174258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433824959360068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |