Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq38 132 6e-26
seq160 96.9 4e-15
>seq38
Length=883156
Score = 132 bits (146), Expect = 6e-26
Identities = 146/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||||||||| ||||| || | || ||| || |||| || |||||||||||||||||
Sbjct 701418 TCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAA 701477
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| || ||||||||||| | || | || |||||| ||| ||| | || | |||| |
Sbjct 701478 ATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC-TGAATCTTCGACTTGACATT 701536
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||||| || || || || | |||||||| |||||||| || ||||| ||
Sbjct 701537 GTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGAC 701596
Query 43172 AAAGATTTGCAT 43183
|||||||||||
Sbjct 701597 GAAGATTTGCAT 701608
Score = 105 bits (116), Expect = 8e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| ||||| || | ||||||||||| ||||| |||||||| | || |||| | |
Sbjct 700937 ACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAGAGGGTCCTCCC 700996
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || | ||||||||||||||| ||||| ||||||||||| | || | | ||||||
Sbjct 700997 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTT 701056
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
||| ||| || || | ||| | | | || || || || || || | || |
Sbjct 701057 GTCTTGGATCTTGCTCTTCA-CGTTGTCGATTGTATCAGAGGACTCAACCTCCAGTGTAA 701115
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| || || || || ||||| || ||||| |||||
Sbjct 701116 TGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039
||||| |||| ||||||||||| |||||||||| || || || | || || || ||
Sbjct 701177 ATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAAGTTG 701236
Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
||| ||||| || ||||| ||||| || |||| || | | |||||| ||| ||| | |
Sbjct 701237 CTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCC-TGAATCT 701295
Query 43100 TTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158
| | |||| | | | ||||| || || || || | ||||| || || || |
Sbjct 701296 TGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTCCGG 701355
Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183
| || ||||| || || ||||||||
Sbjct 701356 TAAGAGTCTTCACGAAAATTTGCAT 701380
>seq160
Length=150305
Score = 96.9 bits (106), Expect = 4e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || | || || ||||||||||||||||| |
Sbjct 102200 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 102141
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | | |||||||||| ||| || |||| |
Sbjct 102140 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 102081
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||||||||| || || |||| || ||||| || ||||| || ||||| || |
Sbjct 102080 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 102021
Query 43174 A 43174
|
Sbjct 102020 A 102020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571810244996120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |