Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq38 132 6e-26 seq160 96.9 4e-15 >seq38 Length=883156 Score = 132 bits (146), Expect = 6e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||| || | || ||| || |||| || ||||||||||||||||| Sbjct 701418 TCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAA 701477 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || || ||||||||||| | || | || |||||| ||| ||| | || | |||| | Sbjct 701478 ATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC-TGAATCTTCGACTTGACATT 701536 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| || || || || | |||||||| |||||||| || ||||| || Sbjct 701537 GTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGAC 701596 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 701597 GAAGATTTGCAT 701608 Score = 105 bits (116), Expect = 8e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||||||||||| ||||| |||||||| | || |||| | | Sbjct 700937 ACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAGAGGGTCCTCCC 700996 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||||||||||||| ||||| ||||||||||| | || | | |||||| Sbjct 700997 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTT 701056 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || || | ||| | | | || || || || || || | || | Sbjct 701057 GTCTTGGATCTTGCTCTTCA-CGTTGTCGATTGTATCAGAGGACTCAACCTCCAGTGTAA 701115 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || ||||| || ||||| ||||| Sbjct 701116 TGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| |||| ||||||||||| |||||||||| || || || | || || || || Sbjct 701177 ATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAAGTTG 701236 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| ||||| || ||||| ||||| || |||| || | | |||||| ||| ||| | | Sbjct 701237 CTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCC-TGAATCT 701295 Query 43100 TTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158 | | |||| | | | ||||| || || || || | ||||| || || || | Sbjct 701296 TGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTCCGG 701355 Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || |||||||| Sbjct 701356 TAAGAGTCTTCACGAAAATTTGCAT 701380 >seq160 Length=150305 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 102200 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 102141 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 102140 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 102081 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || | Sbjct 102080 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 102021 Query 43174 A 43174 | Sbjct 102020 A 102020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810244996120