Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq38 138 7e-28 seq65 89.7 3e-13 >seq38 Length=883156 Score = 138 bits (152), Expect = 7e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34161 ATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG 34220 |||| |||||||| | |||||||||||| | ||| || || ||||| |||||||| |||| Sbjct 700924 ATCCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGG 700983 Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 | || | | || ||||||||||| || ||||| ||||| ||||||||||| || Sbjct 700984 AGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGG 701043 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | | ||||||||| ||||| ||| | | | | || | ||| | || || | Sbjct 701044 GAATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAA 701103 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || ||||| || |||||||| || || || ||||||||||| Sbjct 701104 CCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | ||| ||| || || ||||||||||||||| Sbjct 701382 CCACCACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAC 701441 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| |||| |||| |||||| || |||||||| || ||||||||||| || Sbjct 701442 AAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 701501 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | || | | || | ||| | || ||||| Sbjct 701502 ATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACC 701561 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| |||||||| || || ||||| ||||| Sbjct 701562 TCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608 >seq65 Length=534987 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | || || ||||| ||||||||||| || Sbjct 174122 CCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 174181 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| || || |||||||||||| ||| Sbjct 174182 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGA 174241 Query 34283 ACGCTCTCCTTGTC 34296 | | ||||||||| Sbjct 174242 ATTCCCTCCTTGTC 174255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067948374240