Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq38 118 8e-22 seq160 93.3 3e-14 >seq38 Length=883156 Score = 118 bits (130), Expect = 8e-22 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||| ||||||||||||||| || ||| |||| ||||| || || || ||||| Sbjct 701418 TCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAA 701477 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| ||||| ||||| | |||||||| ||| ||| || ||| || Sbjct 701478 ATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTG 701537 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | |||| | ||| ||||||| ||| || ||||||||||| |||||||| || Sbjct 701538 TCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACG 701597 Query 45326 AAGATTTGCATGTTG 45340 |||||||||||| || Sbjct 701598 AAGATTTGCATGGTG 701612 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| ||||| ||| ||||| ||||||||||| || || ||| | || || | Sbjct 701173 CAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAA 701232 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||| ||||| || || || | |||||||| |||||||| | ||||||||| ||| || Sbjct 701233 GTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAA 701292 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | |||| | ||| || || | || || ||||| | Sbjct 701293 TCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTC 701352 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || ||||||||||| || |||||||| Sbjct 701353 CGGTAAGAGTCTTCACGAAAATTTGCAT 701380 >seq160 Length=150305 Score = 93.3 bits (102), Expect = 3e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| ||| | || || || || || || ||||| | Sbjct 102200 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 102141 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||| ||||| || || | ||||||||||||| || || ||| || Sbjct 102140 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 102081 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 102080 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 102021 Query 45327 A 45327 | Sbjct 102020 A 102020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070245386609