Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq40 255 5e-63 seq38 136 4e-27 seq160 82.4 7e-11 >seq40 Length=974685 Score = 255 bits (282), Expect = 5e-63 Identities = 487/716 (68%), Gaps = 6/716 (1%) Strand=Plus/Minus Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGA 23323 || ||||| ||| | || ||| || |||||||| || | || | ||||| | ||| Sbjct 723556 GCATCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGA 723497 Query 23324 CTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAG 23383 |||| || ||||| || |||| || ||||| || |||| ||||||||| Sbjct 723496 GTCCAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAG 723437 Query 23384 AACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCC 23443 ||||| || ||||| | || ||||| || ||| ||||| | |||||| || || Sbjct 723436 AACAGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCA 723377 Query 23444 AACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCG 23503 || || || || ||||| ||||||||||||| || || ||||| || | ||| || || Sbjct 723376 AAGACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCT 723317 Query 23504 CCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTG 23563 ||||| ||||| || | ||| ||||||||| |||| | ||||| || || | |||||| Sbjct 723316 CCCTGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTA 723257 Query 23564 GACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAA 23623 || | ||| ||| | | || ||| | || || | | |||||||| | | Sbjct 723256 GAAGAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGA 723197 Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683 || || || ||| | | ||||| ||||| || || || |||||||||||||| || Sbjct 723196 CCGATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCT 723137 Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTA 23743 || ||||| ||||| || | |||| | ||| || || | || || | | ||| || Sbjct 723136 TCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTC 723077 Query 23744 GCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTAC 23803 | || ||||||||| || || || || |||||| | ||||| |||| ||| Sbjct 723076 CCAGCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAG 723017 Query 23804 GTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATG 23863 || || ||||| ||||||| | ||||| ||||||| ||| || ||||||| || | Sbjct 723016 GTCTCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAG 722957 Query 23864 TATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATC 23920 | || || | || | ||| | |||||| ||| | ||| || ||||| | | Sbjct 722956 TGCTGGGGACGCTCAGCAACCTT---GCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGT 722900 Query 23921 GTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || || || || ||| ||| ||||| ||||||||||||| || || || || || Sbjct 722899 GTCTTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTT 722844 >seq38 Length=883156 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| |||||||| || ||||| || |||||| | || || || | Sbjct 701609 CATGCAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAG 701550 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| || || ||| ||||| ||| | || || ||||| Sbjct 701549 CGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCA 701490 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || |||||||| || ||| |||| ||| ||| || ||| || || Sbjct 701489 GCAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAA 701430 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||| |||||||||||||| || || ||| | ||| | || |||| Sbjct 701429 CATTCAAAAGGAATCGACTCTTCACCTCGTCCTTCGTCTGCGTGGTGGTA 701380 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||||| || || || || ||||| | || || || | || Sbjct 701380 ATGCAAATTTTCGTGAAGACTCTTACCGGAAAGACTATCACATTAGAAGTCGAGTCTTCA 701321 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| || | || ||||| || Sbjct 701320 GACACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGTATTCCTCCCGATCAA 701261 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || || | ||||| | || || ||||| ||| Sbjct 701260 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGTCGTACCTTGTCTGATTACAAC 701201 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||| || || ||||| || || | ||| | || |||| Sbjct 701200 ATTCAAAAGGAATCCACACTGCATCTTGTCCTCCGTCTGCGTGGTGGTA 701152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || || || | || ||||| | || Sbjct 701152 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 701093 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309 || | |||| | || || ||| || | | |||||||| || | || || ||| Sbjct 701092 GATACAATCGACAACGTGAA---GAGCAAGATCCAAGACAAGGAGGGAATTCCCCCAGAC 701036 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || |||||||| || ||||||||||| | ||| | |||||| Sbjct 701035 CAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTAC 700976 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| || || ||||| || ||||| || Sbjct 700975 AACATTCAGAAGGAGAGCACTCTCCACCTGGTGCT 700941 >seq160 Length=150305 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||||||||| || ||||| | Sbjct 102019 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 102078 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || || ||||||||||| || Sbjct 102079 CGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 102138 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || || || ||||||| || ||||| || || Sbjct 102139 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 102198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760666329680