Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq27 120 6e-22 seq40 107 4e-18 >seq27 Length=857455 Score = 120 bits (132), Expect = 6e-22 Identities = 287/427 (67%), Gaps = 13/427 (3%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| ||||| ||||| || || ||||||||||| ||| | || || ||||| |||| Sbjct 682795 TTGTGGCCTTCGCTGCTGTGGAGGGAATCTTCTTCTCTGGATCTTTTGCTTCCATCTTCT 682736 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| | || | |||| |||||||| | |||||| ||| |||| ||| | | Sbjct 682735 GGCTGAAGAAGCGTGGATTGATGCCGGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 682676 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGAT-ACC 102094 |||| || || || |||||||| ||| | ||||| | || || || Sbjct 682675 ACGAGGGACTGCACACTGACTTTGCCTGCCTTCTGTT---CTCGCACTTAAACCATCGCC 682619 Query 102095 CCATCAAGAGAAAGGATTCTT---GAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151 || |||| |||| || || || || || ||| || || || ||||| || Sbjct 682618 CCGACAAG---AAGG-TTGTTGAGGATATCATCGTTGAGGCTGTGGCCATCGAACAGGAG 682563 Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211 || | |||| | || ||||| | |||| ||||||| ||| ||||| ||||| Sbjct 682562 TTCTTGACAGACGCTCTTCCTGTCGGCCTCCTGGGCATGAACTCTAAGCTGATGTGCCAG 682503 Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAAT 102271 |||||||| || || || || || ||||| | | ||| | ||| |||| || Sbjct 682502 TACATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCCCTCGGAAACAAGAAGTACTACAAC 682443 Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGACCAACTTTTT 102330 | | ||||||||| |||||||| | ||| || || | || | ||||||||||| || Sbjct 682442 TCTCCAAACCCCTTCGACTTCATGGAGAGTATCTCTCTTGCAGGA-AAGACCAACTTCTT 682384 Query 102331 TGAAAAG 102337 ||| ||| Sbjct 682383 TGAGAAG 682377 >seq40 Length=974685 Score = 107 bits (118), Expect = 4e-18 Identities = 179/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || ||||| ||||| || || ||| ||||| || || ||||| Sbjct 723196 CCGATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCT 723137 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 ||||||||||| || | | | | |||||||| || | || ||||| | || Sbjct 723136 TCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTC 723077 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 ||| ||| |||||||| || || ||||| || || || | | |||||||||| || Sbjct 723076 CCAGCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAG 723017 Query 94966 GTTTCAATGACAGATTTGATGTCTGAT-CCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || |||||| | || |||| || | |||||||| ||||| || |||||||| | || Sbjct 723016 GTCTCAATGGCCTTTTCAATGT-TGTTACCGTGAATACCGACGGCAACACGCATCAACAA 722958 Query 95025 GTCCTGAGGGCGCTCA 95040 || ||| || |||||| Sbjct 722957 GTGCTGGGGACGCTCA 722942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989570953262695