Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq40 221 2e-52 seq27 104 3e-17 >seq40 Length=974685 Score = 221 bits (244), Expect = 2e-52 Identities = 588/895 (66%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || |||||||| || |||||| ||| | ||| ||||| ||||| | || | | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308 || || |||| || ||||| ||||| || |||||||| |||| ||||| || Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368 ||||| | | ||| |||||| || || |||||| |||||| | |||| | | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428 | ||| | ||||| || || | ||| || || | | | ||||| || |||||||||||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488 || || | ||||| || ||||| || | || | | ||| |||| ||||||||| || Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548 ||| ||||| || || ||| || ||||||| || || ||||| Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194 Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608 || || || || | || ||||| | || || || | ||||| ||||| ||||| Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134 Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 |||||||| || |||| | | || || || | || ||| | | | ||| || Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 ||||| || | |||||||| || || || || |||| | || | |||| ||| ||| Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014 Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788 ||||| || || || | ||||| || || || |||||||| |||| |||| Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGC 722954 Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848 || || | ||| ||| ||| ||| ||| || || |||||| || | || || Sbjct 722953 TGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTG 722894 Query 63849 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCC 63908 || || ||| ||||||| ||||| || ||||| | |||| | || ||||||| ||| Sbjct 722893 AAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATCG 722834 Query 63909 TTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 63968 || ||| | || || || || | || || || || | ||| | || Sbjct 722833 GCATGTTTCATGACAATTTCATACGTCTCTTTCGATATCATTGGCGCGGGTTGCTTGTTC 722774 Query 63969 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttGTTT 64026 || || || ||||||| ||| | ||| || || || | | || | || || |||| Sbjct 722773 TTGGGGTTGACATAGTGGAAGAGATCTGAGATGAC--CAGCGAGAACTGCTTCTTGGTTT 722716 Query 64027 CCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 |||||| || || || | |||||| | ||| ||||| ||||||||||| || || Sbjct 722715 GCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661 Score = 95.1 bits (104), Expect = 2e-14 Identities = 312/482 (65%), Gaps = 5/482 (1%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 || || |||||||||||||| || | | ||||| || |||||||| || || || ||| Sbjct 724759 GTAAACTGAATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATGCCAGTCTTCAGA 724700 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | ||||||| ||| |||||||| || || ||| | || || | Sbjct 724699 CCCATCTTCCATCCAGCAAAGTGCATACTGGTGAGCTTGCCCATGGTAGGCTCCTTCAGG 724640 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || || |||| ||||||| || || ||||| || || | ||| || ||||||| | | Sbjct 724639 TGAATGTTCAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATTTGCAGG 724580 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || | || | |||||||| | || || || | |||||| || | |||| Sbjct 724579 ATGGCACGCTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTAATGTCGGCGGGAATA 724520 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 || | | ||||||| ||| |||||||| | || || | ||||| || | || | Sbjct 724519 TTGGGAATGTTCTGAACGGAACCACCATCCGCGATGATACGGTTCTTCATGTTGTCCGAC 724460 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | ||| | | | | || || |||||| || || ||||| || ||| Sbjct 724459 CACAGGCCAAGGTCGACAAGATCCTTGAGAAGCCACGGGTTGACGACCTGGAACTCACCA 724400 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | | || | |||| ||| || || ||| || || || | | || || ||| Sbjct 724399 GCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCC 724340 Query 62463 AAAATTTGAGCAGTTG-ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521 | ||| || || | || |||||| ||||| ||||||||||| ||||| || | | ||| Sbjct 724339 AGAATCTG-GCTGGTGCTTGCAGTGGGCATTGGTGCCACCAACAAACTGTTGCGCACACC 724281 Query 62522 GT 62523 || Sbjct 724280 GT 724279 >seq27 Length=857455 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 |||||| |||||||| | | || | ||||| || || ||||| || ||||| | || Sbjct 682662 GTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGCATCAATCC 682721 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 |||||| || ||||| || |||||||| || ||||| || ||||||||||| || || || Sbjct 682722 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCCTCCACAGC 682781 Query 33716 AGCAAAGGCAATAAG 33730 ||| ||||| | ||| Sbjct 682782 AGCGAAGGCCACAAG 682796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809498971120