Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq27 93.3 4e-14 >seq27 Length=857455 Score = 93.3 bits (102), Expect = 4e-14 Identities = 207/311 (67%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 11465 TCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCACC 11524 || || ||||| || || ||||| |||| | | | ||||| || | || | || Sbjct 682483 TCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGGCCGACA 682542 Query 11525 GGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTT 11584 |||| ||| ||||||| ||||||| ||| || || || |||| ||| || | Sbjct 682543 GGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTCAACGATGATATCCTCA 682602 Query 11585 ATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAA 11644 | ||| | ||| || |||| ||| || |||| | || ||||| ||| Sbjct 682603 ACAACCTTCTTGTCGGGGCGATGGTTTAAGTGCGAGAACAGAAGGCAGGCAAAGTCAGTG 682662 Query 11645 TGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCT 11704 || | || ||||| | | || || || || || || || | || ||||||||||| Sbjct 682663 TGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGCATCAATCCA 682722 Query 11705 CGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCT 11764 || || || | ||| || || | |||||| || ||||| ||||| |||||||||||||| Sbjct 682723 CGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCCTCCACAGCA 682782 Query 11765 GCAAATGCTAC 11775 || || || || Sbjct 682783 GCGAAGGCCAC 682793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468518773599760