Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq27 93.3 4e-14
>seq27
Length=857455
Score = 93.3 bits (102), Expect = 4e-14
Identities = 207/311 (67%), Gaps = 0/311 (0%)
Strand=Plus/Plus
Query 11465 TCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCACC 11524
|| || ||||| || || ||||| |||| | | | ||||| || | || | ||
Sbjct 682483 TCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGGCCGACA 682542
Query 11525 GGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTT 11584
|||| ||| ||||||| ||||||| ||| || || || |||| ||| || |
Sbjct 682543 GGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTCAACGATGATATCCTCA 682602
Query 11585 ATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAA 11644
| ||| | ||| || |||| ||| || |||| | || ||||| |||
Sbjct 682603 ACAACCTTCTTGTCGGGGCGATGGTTTAAGTGCGAGAACAGAAGGCAGGCAAAGTCAGTG 682662
Query 11645 TGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCT 11704
|| | || ||||| | | || || || || || || || | || |||||||||||
Sbjct 682663 TGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGCATCAATCCA 682722
Query 11705 CGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCT 11764
|| || || | ||| || || | |||||| || ||||| ||||| ||||||||||||||
Sbjct 682723 CGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCCTCCACAGCA 682782
Query 11765 GCAAATGCTAC 11775
|| || || ||
Sbjct 682783 GCGAAGGCCAC 682793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468518773599760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |