Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq40 194 2e-44 >seq40 Length=974685 Score = 194 bits (214), Expect = 2e-44 Identities = 582/895 (65%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || |||||||| || |||||| ||| ||||| ||||| ||||| | || | | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || |||| || ||||| ||||| || |||||||| |||| ||||| || Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||| | || ||| |||||| || || |||||| |||||| | |||| | | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | ||| ||||| || || | ||| || || | | | ||||| || |||||||||||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 || || | ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCT 66341 | ||| ||||| || || ||| || | ||||| || || ||||| Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194 Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 66401 || || || || | || ||||| | || || || | || || ||||| || || Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134 Query 66402 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 66461 || ||||| ||| |||| | | || || || | || ||| | | ||| || Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074 Query 66462 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 66521 ||||| || | |||||||| || || || || |||| | || | |||| ||| ||| Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014 Query 66522 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 66581 ||||| || || || | ||||| || || || |||||||| |||| |||| Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGC 722954 Query 66582 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 66641 || || | ||| | | |||| ||| ||| || || |||||| || | || || Sbjct 722953 TGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTG 722894 Query 66642 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 66701 || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | ||| Sbjct 722893 AAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATCG 722834 Query 66702 TTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 66761 || ||| | || | || || | || || || || | ||| | || Sbjct 722833 GCATGTTTCATGACAATTTCATACGTCTCTTTCGATATCATTGGCGCGGGTTGCTTGTTC 722774 Query 66762 TTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttGTTT 66819 || || |||||||||| ||| | ||| || || || | | || | || || |||| Sbjct 722773 TTGGGGTTGACATAGTGGAAGAGATCTGAGATGAC--CAGCGAGAACTGCTTCTTGGTTT 722716 Query 66820 CTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 ||||| || || || |||||||| | || |||| ||||||||||| || || Sbjct 722715 GCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661 Score = 95.1 bits (104), Expect = 2e-14 Identities = 342/531 (64%), Gaps = 13/531 (2%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 || || |||||||||||||| || | | ||||| || |||||||| || || || ||| Sbjct 724759 GTAAACTGAATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATGCCAGTCTTCAGA 724700 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | ||||||| ||| |||||||| || || ||| | || || | Sbjct 724699 CCCATCTTCCATCCAGCAAAGTGCATACTGGTGAGCTTGCCCATGGTAGGCTCCTTCAGG 724640 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || || |||| ||||||| || || ||||| || || | ||| || ||||||| | | Sbjct 724639 TGAATGTTCAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATTTGCAGG 724580 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || | || | |||||||| | || || || | |||||| || | |||| Sbjct 724579 ATGGCACGCTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTAATGTCGGCGGGAATA 724520 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 || | | ||||||| ||| |||||||| || || || | ||||| || | || | Sbjct 724519 TTGGGAATGTTCTGAACGGAACCACCATCCGCGATGATACGGTTCTTCATGTTGTCCGAC 724460 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | ||| | | | | || || ||| || || || || || || ||| Sbjct 724459 CACAGGCCAAGGTCGACAAGATCCTTGAGAAGCCACGGGTTGACGACCTGGAACTCACCA 724400 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | | || | |||| ||| || || ||| || || || | | | || || ||| Sbjct 724399 GCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCC 724340 Query 65256 AAAATTTGAGCAGTTG-ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 65314 | ||| || || | || |||||| ||||| ||||||||||| ||||| || | | ||| Sbjct 724339 AGAATCTG-GCTGGTGCTTGCAGTGGGCATTGGTGCCACCAACAAACTGTTGCGCACACC 724281 Query 65315 GTATGTTCTG----ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 65361 |||||| || || | || |||| ||||| | ||| || |||| Sbjct 724280 ----GTTCTGGGCAATCTTCGCCTTCAGAGCATCCCAGTCCCAGAGGTCCG 724234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164334252360