Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq38 98.7 1e-15 seq27 86.0 6e-12 >seq38 Length=883156 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || || || ||||||||||| || ||| | Sbjct 701382 CCACCACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAC 701441 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || ||||| |||||||| | ||||| || ||||| || ||||| Sbjct 701442 AAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 701501 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || || || ||| | || | || | | || | |||||| ||| ||| || Sbjct 701502 ATGCCCTCCTTATC-CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC 701560 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||| || | || || ||||| |||||||| Sbjct 701561 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608 >seq27 Length=857455 Score = 86.0 bits (94), Expect = 6e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || | ||| ||| | ||||| || || |||||| | || || | ||||| Sbjct 682586 GAGGCTGTGGCCATCGAACAGGAGTTCTTGACAGACGCTCTTCCTGTCGGCCTCCTGGGC 682527 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||| | | |||||||| ||||||| ||||| ||||| ||| | |||||| | Sbjct 682526 ATGAACTCTAAGCTGATGTGCCAGTACATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCC 682467 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||| ||||| || | | |||||||| || ||| | | || || Sbjct 682466 CTCGGAAACAAGAAGTACTACAACTCTCCAAACCCCTTCGACTTCATGGAGAGTATCTCT 682407 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | || || || ||||| || |||| ||||| || || ||| Sbjct 682406 CTTGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTAC 682362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496057619376800