Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq38 114 1e-20 >seq38 Length=883156 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||| | | || | ||| | ||| |||||||| | |||||||| ||| Sbjct 701154 CCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGAC 701213 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || ||||| | || || | ||| || || ||||| || | ||||||||||||| || Sbjct 701214 AAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGA 701273 Query 43003 ACACCTTCTTTTTCGCTG-ATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060 | ||| || || || ||| ||| ||| ||||| || | | ||||| || ||||| Sbjct 701274 ATACCCTCCTTATC-CTGAATCTTGCTC-TTGACATTGTCGATGGTGTCTGAAGACTCGA 701331 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 701332 CTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381364817267682