Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq40 194 2e-44 seq27 100 4e-16 >seq40 Length=974685 Score = 194 bits (214), Expect = 2e-44 Identities = 582/895 (65%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || |||||||| || || ||| | | ||||| |||||| ||||| | || | | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || || || | | ||||| ||||| || |||||||| |||| ||||| || Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 ||||| | || ||| ||||| || || |||||| |||||| | |||| | | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 | ||| | ||||| || || | ||| || || | | | || || || |||||||||||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 || || | ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303 | ||| ||||| || || ||| || ||||||| || | || ||||| Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194 Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 72363 || || || || | || ||||| | || || || | || || ||||| || || Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134 Query 72364 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 72423 || ||||| ||| |||| | | || || || | || ||| | | ||| || Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074 Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 72483 ||||| || | |||||||| || || || || |||| | |||| |||| ||| ||| Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014 Query 72484 TCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGC 72543 ||||| || ||| || | || || || || || |||||||| |||| ||| Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGC 722954 Query 72544 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 72603 || || | ||| | | |||| || ||| || || |||||| || | || || Sbjct 722953 TGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTG 722894 Query 72604 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCC 72663 || || ||| ||||||| ||||| || ||||| | |||| | || ||||| | ||| Sbjct 722893 AAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATCG 722834 Query 72664 TTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 72723 || ||| | || || || || | || || || || | ||| | || Sbjct 722833 GCATGTTTCATGACAATTTCATACGTCTCTTTCGATATCATTGGCGCGGGTTGCTTGTTC 722774 Query 72724 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttGTTT 72781 || || || ||||||| ||| | ||| || || || | | || | || || |||| Sbjct 722773 TTGGGGTTGACATAGTGGAAGAGATCTGAGATGAC--CAGCGAGAACTGCTTCTTGGTTT 722716 Query 72782 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 |||||| || || || |||||||| | ||| ||||| ||||||||||| || || Sbjct 722715 GCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661 Score = 107 bits (118), Expect = 3e-18 Identities = 191/278 (69%), Gaps = 3/278 (1%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 |||||||||||||||| ||| || || | ||||| || ||||||||||| || || ||| Sbjct 724759 GTAAACTGAATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATGCCAGTCTTCAGA 724700 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || | ||||||| ||| |||||||| || || ||| | |||| || | | Sbjct 724699 CCCATCTTCCATCCAGCAAAGTGCATACTGGTGAGCTTGCCCATGGTAGGCTCCTTCAGG 724640 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 ||||| |||| || ||| || || ||||| || || | ||| || ||||||| | | Sbjct 724639 TGAATGTTCAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATTTGCAGG 724580 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 || | || | |||||||| | || || || | |||||| || | |||| Sbjct 724579 ATGGCACGCTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTAATGTCGGCGGGAATA 724520 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075 || | | ||||||| ||| |||||||| || || || Sbjct 724519 TTGGGAATGTTCTGAACGGAACCACCATCCGCGATGAT 724482 >seq27 Length=857455 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 |||||| ||||| || | | || | |||||||| || ||||| || ||||| | || Sbjct 682662 GTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGCATCAATCC 682721 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 |||||| || ||||| || || || ||||| |||||||| ||||||||||| || || || Sbjct 682722 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCCTCCACAGC 682781 Query 42199 CGCAAAGGCAATAAG 42213 || ||||| | ||| Sbjct 682782 AGCGAAGGCCACAAG 682796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671130567472040