Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq38 87.8 2e-12
seq27 82.4 8e-11
>seq38
Length=883156
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | || | ||| | ||| ||||| ||||| ||||||||||| |
Sbjct 701154 CCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGAC 701213
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| ||||| || |||||| |||| ||||| || |||||||||||
Sbjct 701214 AAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGA 701273
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || || || ||| || || | | || | ||||| | | || |||
Sbjct 701274 ATACCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACT 701333
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||| ||||| | || || ||||| |||||||||
Sbjct 701334 TCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCATA 701381
>seq27
Length=857455
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691
|| || || | ||||||| | ||||| || || |||||| | || || | | |||||
Sbjct 682586 GAGGCTGTGGCCATCGAACAGGAGTTCTTGACAGACGCTCTTCCTGTCGGCCTCCTGGGC 682527
Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50751
|||||| | | |||||||| ||||||||||||| ||||| ||| | ||||| |
Sbjct 682526 ATGAACTCTAAGCTGATGTGCCAGTACATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCC 682467
Query 50752 CTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCG 50811
|| ||| | ||| ||||| || | | |||||||| || ||| | | || ||
Sbjct 682466 CTCGGAAACAAGAAGTACTACAACTCTCCAAACCCCTTCGACTTCATGGAGAGTATCTCT 682407
Query 50812 TTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856
| | || || || ||||| || || | ||||| || || |||
Sbjct 682406 CTTGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTAC 682362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507007878527280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |