Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq38 87.8 2e-12 seq27 82.4 8e-11 >seq38 Length=883156 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | || | ||| | ||| ||||| ||||| ||||||||||| | Sbjct 701154 CCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGAC 701213 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| ||||| || |||||| |||| ||||| || ||||||||||| Sbjct 701214 AAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGA 701273 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || || || ||| || || | | || | ||||| | | || ||| Sbjct 701274 ATACCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACT 701333 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| ||||| | || || ||||| ||||||||| Sbjct 701334 TCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCATA 701381 >seq27 Length=857455 Score = 82.4 bits (90), Expect = 8e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || || || | ||||||| | ||||| || || |||||| | || || | | ||||| Sbjct 682586 GAGGCTGTGGCCATCGAACAGGAGTTCTTGACAGACGCTCTTCCTGTCGGCCTCCTGGGC 682527 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50751 |||||| | | |||||||| ||||||||||||| ||||| ||| | ||||| | Sbjct 682526 ATGAACTCTAAGCTGATGTGCCAGTACATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCC 682467 Query 50752 CTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCG 50811 || ||| | ||| ||||| || | | |||||||| || ||| | | || || Sbjct 682466 CTCGGAAACAAGAAGTACTACAACTCTCCAAACCCCTTCGACTTCATGGAGAGTATCTCT 682407 Query 50812 TTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 | | || || || ||||| || || | ||||| || || ||| Sbjct 682406 CTTGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTAC 682362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507007878527280