Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq38 93.3 4e-14 >seq38 Length=883156 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| ||||||||||| | ||| || ||| || |||| | ||||||||||| Sbjct 701405 GTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTG 701464 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || | || || | | ||||| || ||||| || || || || || | ||| || Sbjct 701465 CTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTT 701524 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTTTCCA 94981 | |||||| | | | |||||| || ||| ||||| || | |||||||| || || Sbjct 701525 CGACTTGACATTGTCAATAGTGTC-GC-TGGACTCGACCTCCAAGGTGATGGTCTTGCCC 701582 Query 94982 GTAAGAGTTTTCACAAAGATCTGCATG 95008 || ||||| || || ||||| |||||| Sbjct 701583 GTGAGAGTCTTGACGAAGATTTGCATG 701609 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTC 94857 |||| |||| || ||||||||||| | ||| ||||| || || || || ||| || Sbjct 701173 CAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACA-AG-GTACGACCATCTTC 701230 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || ||||| ||||||| | | || ||||| ||||||||||| || || || | Sbjct 701231 AAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTG 701290 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || |||||| | ||| ||||| | ||||| || | ||||| || || Sbjct 701291 AATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTT 701350 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| |||||||| ||||| || || ||||| Sbjct 701351 TCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285433854440