Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq141 194 3e-45 seq108 172 9e-39 >seq141 Length=51265 Score = 194 bits (214), Expect = 3e-45 Identities = 200/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || |||||||| || ||||||||||| ||||| Sbjct 11359 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 11301 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 11300 TCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 11241 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| |||||| || ||| |||| ||| ||| || ||| || || Sbjct 11240 CCGTGGTGTCCTCAAGACCTTCCTTGAGGGCGTCATCCGTGACGCTGTCACCTACACTGA 11181 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||||||||| ||| | || |||||||||| |||| | ||||| Sbjct 11180 GCACGCCAAGAGAAAGACTGTCACTTCCCTCGACGTCGTCTATGCTCTGAAGAGACAAGG 11121 Query 16672 CCGTAAG-ATTTATGGTT 16688 |||||| || | ||||| Sbjct 11120 ACGTAAGCATCTCTGGTT 11103 >seq108 Length=340101 Score = 172 bits (190), Expect = 9e-39 Identities = 197/262 (75%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | || || |||||||| || || ||||| || |||| Sbjct 35797 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATTACCAAACCTGCTA 35855 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 35856 TCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 35915 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | ||| ||||||| || | || |||| |||||| || ||| || | Sbjct 35916 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCGGTCATCCGTGATGCCGTCACCTACACGG 35975 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || || ||||| |||||||| | ||| |||||||||| | || || || | Sbjct 35976 AACACGCCAAGCGCAAGACCGTCACCTCGCTCGATGTCGTCTATGCCCTCAAGCGCCAGG 36035 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| || Sbjct 36036 GCCGTACCCTCTACGGTTTCGG 36057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074259178097