Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq141 194 3e-45
seq108 172 9e-39
>seq141
Length=51265
Score = 194 bits (214), Expect = 3e-45
Identities = 200/258 (78%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || |||||||| || ||||||||||| |||||
Sbjct 11359 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 11301
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||| |||||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 11300 TCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 11241
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| |||||| || ||| |||| ||| ||| || ||| || ||
Sbjct 11240 CCGTGGTGTCCTCAAGACCTTCCTTGAGGGCGTCATCCGTGACGCTGTCACCTACACTGA 11181
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||||||||| ||| | || |||||||||| |||| | |||||
Sbjct 11180 GCACGCCAAGAGAAAGACTGTCACTTCCCTCGACGTCGTCTATGCTCTGAAGAGACAAGG 11121
Query 16672 CCGTAAG-ATTTATGGTT 16688
|||||| || | |||||
Sbjct 11120 ACGTAAGCATCTCTGGTT 11103
>seq108
Length=340101
Score = 172 bits (190), Expect = 9e-39
Identities = 197/262 (75%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| || | ||||| | || || |||||||| || || ||||| || ||||
Sbjct 35797 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATTACCAAACCTGCTA 35855
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || ||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 35856 TCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 35915
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | ||| ||||||| || | || |||| |||||| || ||| || |
Sbjct 35916 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCGGTCATCCGTGATGCCGTCACCTACACGG 35975
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || || ||||| |||||||| | ||| |||||||||| | || || || |
Sbjct 35976 AACACGCCAAGCGCAAGACCGTCACCTCGCTCGATGTCGTCTATGCCCTCAAGCGCCAGG 36035
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||||| | || ||||| ||
Sbjct 36036 GCCGTACCCTCTACGGTTTCGG 36057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074259178097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |