Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq40 230 3e-55 seq27 118 1e-21 >seq40 Length=974685 Score = 230 bits (254), Expect = 3e-55 Identities = 590/895 (66%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || |||||||| || |||||| ||| ||||| ||||| ||||| | || | | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || |||| || ||||| ||||| || |||||||| |||| ||||| || Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 ||||| | || ||| |||||| || || |||||| |||||| | |||| | | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||| | ||||| || || | ||| || || | | | ||||| || |||||||||||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||||| || ||||| || | || | | ||| |||| ||||||||| || Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497 ||| ||||| || || ||| || ||||||| || || ||||| Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194 Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557 || || || || | || ||||| | || || || | ||||| |||||||| || Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134 Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617 |||||||| || |||| | | || || || | || ||| | | ||| || Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074 Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677 ||||| || | |||||||| || || || || |||| | || | |||| ||| ||| Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014 Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737 ||||| || || || | ||||| || || || |||||||| |||| |||| Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGC 722954 Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63797 || || | ||| | | |||| ||| ||| || || |||||| || | || || Sbjct 722953 TGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTG 722894 Query 63798 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 63857 || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | ||| Sbjct 722893 AAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATCG 722834 Query 63858 TTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 63917 || ||| | || || || || | || || || || | ||| | || Sbjct 722833 GCATGTTTCATGACAATTTCATACGTCTCTTTCGATATCATTGGCGCGGGTTGCTTGTTC 722774 Query 63918 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttGTTT 63975 || || || ||||||| ||| | ||| || || || | | || | || || |||| Sbjct 722773 TTGGGGTTGACATAGTGGAAGAGATCTGAGATGAC--CAGCGAGAACTGCTTCTTGGTTT 722716 Query 63976 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 |||||| || || || |||||||| | ||| ||||| ||||||||||| || || Sbjct 722715 GCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661 Score = 91.5 bits (100), Expect = 2e-13 Identities = 341/531 (64%), Gaps = 13/531 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || || |||||||||||||| || | | ||||| || |||||||| || || || ||| Sbjct 724759 GTAAACTGAATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATGCCAGTCTTCAGA 724700 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | ||||||| ||| |||||||| || || ||| | || || | Sbjct 724699 CCCATCTTCCATCCAGCAAAGTGCATACTGGTGAGCTTGCCCATGGTAGGCTCCTTCAGG 724640 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || || |||| ||||||| || || ||||| || || | ||| || ||||||| | | Sbjct 724639 TGAATGTTCAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATTTGCAGG 724580 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || | || | |||||||| | || || || | |||||| || | |||| Sbjct 724579 ATGGCACGCTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTAATGTCGGCGGGAATA 724520 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | | ||||||| ||| |||||||| || || || | ||||| || | || | Sbjct 724519 TTGGGAATGTTCTGAACGGAACCACCATCCGCGATGATACGGTTCTTCATGTTGTCCGAC 724460 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | ||| | | | | || || ||| || || || || || || ||| Sbjct 724459 CACAGGCCAAGGTCGACAAGATCCTTGAGAAGCCACGGGTTGACGACCTGGAACTCACCA 724400 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | | || | |||| ||| || || ||| || || || | | || || ||| Sbjct 724399 GCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCC 724340 Query 62412 AAAATTTGAGCAGTTG-ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470 | ||| || || | || |||||| ||||| ||||||||||| ||||| || | | ||| Sbjct 724339 AGAATCTG-GCTGGTGCTTGCAGTGGGCATTGGTGCCACCAACAAACTGTTGCGCACACC 724281 Query 62471 GTATGTTCTG----ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62517 |||||| || || | || |||| ||||| | ||| || |||| Sbjct 724280 ----GTTCTGGGCAATCTTCGCCTTCAGAGCATCCCAGTCCCAGAGGTCCG 724234 >seq27 Length=857455 Score = 118 bits (130), Expect = 1e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 |||||| |||||||| | | || || |||||||| || ||||| || ||||| | || Sbjct 682662 GTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGCATCAATCC 682721 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 |||||| || ||||| || |||||||| || |||||||| ||||||||||| || || || Sbjct 682722 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCCTCCACAGC 682781 Query 33438 AGCAAAGGCAATAAG 33452 ||| ||||| | ||| Sbjct 682782 AGCGAAGGCCACAAG 682796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939187341640