Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq38 93.3 4e-14 seq27 82.4 7e-11 >seq38 Length=883156 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || ||||| | || || | ||||||||| | Sbjct 701380 ATGCAAATTTTCGTGAAGACTCTTACCGGAAAGACTATCACATTAGAAGTCGAGTCTTCA 701321 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| || || || || || |||||||||||| Sbjct 701320 GACACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGTATTCCTCCCGATCAA 701261 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | || |||||||| ||||||| | | | | ||||| ||| Sbjct 701260 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGTCGTACCTTGTCTGATTACAAC 701201 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 |||||||| ||||| ||| | ||| Sbjct 701200 ATTCAAAAGGAATCCACACTGCAT 701177 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | || ||| | || |||||| ||| | Sbjct 701608 ATGCAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 701549 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| || || || ||||| ||||| || || Sbjct 701548 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 701489 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||||| || || ||||| || || || | | | | | ||| || ||| Sbjct 701488 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAAC 701429 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 |||||||| ||||| || |||| Sbjct 701428 ATTCAAAAGGAATCGACTCTTCA 701406 >seq27 Length=857455 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || || || || || ||||| || || ||||| || | ||||| ||| | | ||| Sbjct 682362 GTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATACTCTCCAT 682421 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || || || | || || | || || || ||| |||||| || Sbjct 682422 GAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACCAACAGCCG 682481 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGAC 104771 || || || || || ||||||| |||||| | | ||||||||||| | |||| Sbjct 682482 GTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGGCCGAC 682541 Query 104772 GGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 || | ||||| || || || || | |||||| |||| || || Sbjct 682542 AGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTC 682586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429930608199495