Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq38 120 2e-22
seq982 102 5e-17
>seq38
Length=883156
Score = 120 bits (132), Expect = 2e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||| | || | ||| || ||| ||||||||||| ||||||||||
Sbjct 701152 TACCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAG 701211
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| | || || | ||| ||||| ||||| || || || |||||||||| |
Sbjct 701212 ACAAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAG 701271
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || || || ||| ||| || ||| ||||| | || || ||| | || |
Sbjct 701272 GAATACCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGA 701331
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||||||| ||||| || || || | || |||||||| || |||||
Sbjct 701332 CTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380
Score = 82.4 bits (90), Expect = 5e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||| | || | |||||||| ||||||||||| ||||| || |
Sbjct 701380 TACCACCACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGG 701439
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||||| || |||| || | || || || || || || ||||| || || || | |
Sbjct 701440 ACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAG 701499
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||| || || ||| ||| || ||| ||||| | | ||| || | || |
Sbjct 701500 GGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGA 701559
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| || || || || || || ||||| | || || ||||| || ||||||
Sbjct 701560 CCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTGCATG 701609
>seq982
Length=125
Score = 102 bits (112), Expect = 5e-17
Identities = 67/74 (91%), Gaps = 5/74 (7%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 74 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 15
Query 25957 TAATCCTTTCATGC 25970
|||||| |||||||
Sbjct 14 TAATCCATTCATGC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334942999448099
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |