Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq27 105 7e-18 >seq27 Length=857455 Score = 105 bits (116), Expect = 7e-18 Identities = 199/288 (69%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| || | ||| || || | || ||||| | ||||| || || ||| Sbjct 682968 ATGTATGTATCAATCAGCAGGGAGTATGTCTCCGAATGAATGTTCTCAATCATGATCTGG 683027 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTC-TTGAGAAAATCTCTCTACGAG 93480 || |||||||| || | ||| || | | |||||| || ||| ||| | ||| | || Sbjct 683028 AAGCCGTAGAAGCACCGAGCCTCAGGCACCTGCACCTCATTGCTGAAA-CGCTCCAGCAG 683086 Query 93481 ATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG 93540 || |||||||| || || || || || || || || || | | ||| || || | Sbjct 683087 GTTCTCATTGACGATTCCGTCAGAGGCAGCGAAGAAGGCAAGGACATGAGAGATGAAGTA 683146 Query 93541 TTTCTCATCATC-TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTC 93597 |||||| || |||| || || | ||| ||| |||||||| || ||||| | || Sbjct 683147 ACGCTCATCGTCATTTAGGCGGTTGTTCCAGTCGTGCAGATCTTTAGAGAGATCAATCTC 683206 Query 93598 TTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| | ||||| || || ||||| ||||| |||||||| | ||| || Sbjct 683207 CTCGGCGGTCCAGAAGGAAGCTTCGGCTTTCTTGTACATTTGCCAAAT 683254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556853637377960