Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq27 105 7e-18
>seq27
Length=857455
Score = 105 bits (116), Expect = 7e-18
Identities = 199/288 (69%), Gaps = 5/288 (2%)
Strand=Plus/Plus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||||||||| || | ||| || || | || ||||| | ||||| || || |||
Sbjct 682968 ATGTATGTATCAATCAGCAGGGAGTATGTCTCCGAATGAATGTTCTCAATCATGATCTGG 683027
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTC-TTGAGAAAATCTCTCTACGAG 93480
|| |||||||| || | ||| || | | |||||| || ||| ||| | ||| | ||
Sbjct 683028 AAGCCGTAGAAGCACCGAGCCTCAGGCACCTGCACCTCATTGCTGAAA-CGCTCCAGCAG 683086
Query 93481 ATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG 93540
|| |||||||| || || || || || || || || || | | ||| || || |
Sbjct 683087 GTTCTCATTGACGATTCCGTCAGAGGCAGCGAAGAAGGCAAGGACATGAGAGATGAAGTA 683146
Query 93541 TTTCTCATCATC-TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTC 93597
|||||| || |||| || || | ||| ||| |||||||| || ||||| | ||
Sbjct 683147 ACGCTCATCGTCATTTAGGCGGTTGTTCCAGTCGTGCAGATCTTTAGAGAGATCAATCTC 683206
Query 93598 TTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
||| | ||||| || || ||||| ||||| |||||||| | ||| ||
Sbjct 683207 CTCGGCGGTCCAGAAGGAAGCTTCGGCTTTCTTGTACATTTGCCAAAT 683254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556853637377960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |