Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq27 127 4e-24
seq95 98.7 2e-15
>seq27
Length=857455
Score = 127 bits (140), Expect = 4e-24
Identities = 277/406 (68%), Gaps = 14/406 (3%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|| ||||| || | ||| || | |||||||| |||||||||||||||||||||||
Sbjct 682381 TCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATACTCTCCATGAAGTCGAAGGGGTTTGGA 682440
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| | ||| | || || || || || | ||||| || || ||||| |
Sbjct 682441 GAGTTGTAGTACTTCTTGTTTCCGAGGGCGACCAACAGCCGGTCAGCAACGAACTCAATG 682500
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741
||||| | |||||| | |||||||||||| | | |||| ||||| || || |
Sbjct 682501 TACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGGCCGAC-AGGAAGAGCGTCTGTCAA 682559
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT--GTGCCAGA 251796
||| |||| |||| |||| || ||||| | | || ||| |||| || | |
Sbjct 682560 GAACTCCTGTTCGATGGCCACAGCCTCAACGATGATATCCTCAACAACCTTCTTGTCGGG 682619
Query 251797 GACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCG 251856
| | | ||| | | ||| |||| || | |||| | |||||| ||||||
Sbjct 682620 G--CGATGGTT---TAAGTGCGAGAACAGAAGGCAGGCAAAGTCAGTGTGCAGTCCCTCG 682674
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|| ||| ||||| ||||||||| | | || || ||||||| ||||| ||| | |||
Sbjct 682675 TCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGCATCAATCCACGCTTCTTCAGC 682734
Query 251917 CAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||||| | |||||| ||||||||||| | | ||||| |||
Sbjct 682735 CAGAAGATGGAAGCAAAA-GATCCAGAGAAGAAGATTCCCTCCACA 682779
>seq95
Length=732127
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205
|| || ||| || ||| || |||| || || || ||||| ||||| ||||| || |||
Sbjct 142319 CAAGTCTCTCTGGGCTCTCGTATTGCCGTTATCGGTCCCAACGGTGCTGGTAAATCCACC 142378
Query 280206 CTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCC 280265
|| |||| ||||||||||| ||| | |||| | || || | ||||
Sbjct 142379 CTCGTCAACGTCCTGACTGGTGAGCTCATCCCCACCGGTGGTGATGTCTACCAGCACGAG 142438
Query 280266 AACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGAC 280325
||||| || || || ||| || ||||| |||||| |||||||| |||||||| |||
Sbjct 142439 AACATCCGTATCGCCTACATCAAGCAGCATGCTTTCGCTCACATCGATAACCACCTCGAC 142498
Query 280326 ATGACTCCTAACCAATACATTCAGTGGCG 280354
| |||||| | ||||||||||||||
Sbjct 142499 AAGACTCCCTCTGAGTACATTCAGTGGCG 142527
Score = 96.9 bits (106), Expect = 7e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||| ||||| || |||| ||||| || || ||||||| ||||| ||||| |||
Sbjct 141518 GGTGAAGATCTCTGCAACTGCACGTTCTCTCTGGCCTATGGTGCCAAGATCCTGCTGAAC 141577
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
||| ||| | | |||||||| | || || ||||| |||| || || || |
Sbjct 141578 CAGACCTCTCTCCGCCTGAAGCGTGGTCAGCGTTACGGTCTTCTCGGACCTAACGGTACC 141637
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
||||||| ||||| ||||||||||| |||| ||||| ||||| || || ||
Sbjct 141638 GGTAAGACTACTCTGATGCGCGCCATCAACAACGAGCAGCTTGAAGGTTTCCCCAAGAAG 141697
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557
||||| | ||| || || || |||||||||
Sbjct 141698 GACGAGGTCAAGACTGTCTACGTTGAGCACGAC 141730
Score = 86.0 bits (94), Expect = 1e-11
Identities = 102/136 (75%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| || || |||||||| || || || ||| ||||| | ||| ||| || ||
Sbjct 142922 CACTCACGTATGCGCGGTCTCTCCGGTGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 142981
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | |||||||| ||||| ||||||||||| |||||||| || ||||| ||
Sbjct 142982 TC-GTGGCAGCGTCCTCACGTCATCGTCCTCGACGAGCCCACCAACTACCTCGACCGTGA 143040
Query 280823 GAGCCTGGGCGCTCTG 280838
||||| || |||
Sbjct 143041 CTCTCTGGGTGCCCTG 143056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027823248935389
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |