Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq38 190 4e-43
seq27 122 2e-22
seq160 120 6e-22
seq95 91.5 3e-13
>seq38
Length=883156
Score = 190 bits (210), Expect = 4e-43
Identities = 183/235 (78%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
||||| ||| ||||| || |||| |||| ||| || ||| ||| || || ||||| |
Sbjct 700918 TTTAACATCCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGT 700977
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
|||||||||| |||||||||||||| |||||||| || ||||| ||||| | || ||||
Sbjct 700978 AATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGT 701037
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || ||||| || ||||||||||| ||||| ||| ||| ||||| || || | |
Sbjct 701038 CTGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGG 701097
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || |||| || ||||| ||||| ||||| ||||||||||| ||||||||
Sbjct 701098 ACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152
Score = 141 bits (156), Expect = 2e-28
Identities = 157/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || ||||| || ||||| ||||| ||||| || | || | |||||||| |
Sbjct 701173 CAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAA 701232
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||| || || || ||||| | ||||| ||||| ||||| || ||||| || ||||
Sbjct 701233 GTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAA 701292
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| |||||| ||||||||||||| || || ||||| || ||||| || ||||
Sbjct 701293 TCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTC 701352
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || ||||| ||||| || |||||
Sbjct 701353 CGGTAAGAGTCTTCACGAAAATTTGCAT 701380
Score = 138 bits (152), Expect = 2e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || || || ||||| ||||| || |||||
Sbjct 701382 CCACCACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAC 701441
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || || || | |||||| || ||||| || || | || ||||| || ||
Sbjct 701442 AAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 701501
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
||||| ||||| || |||||||| | |||||| || || ||||| |||| | || ||
Sbjct 701502 ATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTGGACTCGAC 701560
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||||||||| || |||||||| ||||||||||| || |||||
Sbjct 701561 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608
>seq27
Length=857455
Score = 122 bits (134), Expect = 2e-22
Identities = 318/475 (67%), Gaps = 20/475 (4%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || ||| |||||||||| ||| || |
Sbjct 682344 CATGACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 682403
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || || |||||||||||| |||||||| | | | | ||| || ||
Sbjct 682404 AAGAGAGATACTCTCCATGAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCC 682463
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || || | |||||||| |||||||| |||||||||| |||||| | |||||
Sbjct 682464 GAGGGCGACCAACAGCCGGTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTT 682523
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||| | | || | || | ||||| | ||| |||| |||| |||| || ||
Sbjct 682524 CATGCCCAGGAGGCCGACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGC 682583
Query 10175 TTCCTCGACGATGCTCTTTACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228
|| ||| ||| || || || ||| ||| | | | ||| | | |||
Sbjct 682584 CTCAACGATGATATCCTCAACAACCTTCTTGTC--GGGGC-GATGGTT---TAAGTGCGA 682637
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
|||| || |||| | ||| || |||||||| || ||||| |||||||||
Sbjct 682638 GAACAGAAGGCAGGCAAAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGA 682697
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACC 10347
||| ||||| ||||| | || || || ||||||||| |||| ||| || || |
Sbjct 682698 GAAAGTGAGACCCGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCA-AAAGATC 682756
Query 10348 CGGAGAACAGAAGA--CCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAA 10399
| |||| |||||| |||||||| ||| | |||| || || |||| |||||
Sbjct 682757 CAGAGA--AGAAGATTCCCTCCACAGCA-GCGAAGGCCACAAGACGCTGGGCGAA 682808
>seq160
Length=150305
Score = 120 bits (132), Expect = 6e-22
Identities = 136/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| || ||||| ||
Sbjct 102198 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 102139
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || || || || |||||||| || ||||| |||||||| |||
Sbjct 102138 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 102079
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 102078 ATGGTGTC-GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 102020
>seq95
Length=732127
Score = 91.5 bits (100), Expect = 3e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876
|||||| || || ||||| | || || || || | ||| ||| |||| || | ||
Sbjct 141691 GGGGAAACCTTCAAGCTGCTCGTTGTTGATGGCGCGCATCAGAGTAGTCTTACCGGTACC 141632
Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936
||| || |||| || |||||| | | || ||||| | | ||| || ||||||
Sbjct 141631 GTTAGGTCCGAGAAGACCGTAACGCTGACCACGCTTCAGGCGGAGAGAGGTCTGGTTCAG 141572
Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
||||||||| |||||||||| || |||||| ||| | ||| || || |||||||||||
Sbjct 141571 CAGGATCTTGGCACCATAGGCCAGAGAGAACGTGCAGTTGCAGAGATCTTCACCCTCCTC 141512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921610545631880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |