Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq38 190 4e-43 seq27 122 2e-22 seq160 120 6e-22 seq95 91.5 3e-13 >seq38 Length=883156 Score = 190 bits (210), Expect = 4e-43 Identities = 183/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 ||||| ||| ||||| || |||| |||| ||| || ||| ||| || || ||||| | Sbjct 700918 TTTAACATCCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGT 700977 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||||||||| |||||||||||||| |||||||| || ||||| ||||| | || |||| Sbjct 700978 AATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGT 701037 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || ||||| || ||||||||||| ||||| ||| ||| ||||| || || | | Sbjct 701038 CTGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGG 701097 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||| || ||||| ||||| ||||| ||||||||||| |||||||| Sbjct 701098 ACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| || ||||| ||||| ||||| || | || | |||||||| | Sbjct 701173 CAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAA 701232 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||| || || || ||||| | ||||| ||||| ||||| || ||||| || |||| Sbjct 701233 GTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAA 701292 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| |||||| ||||||||||||| || || ||||| || ||||| || |||| Sbjct 701293 TCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTC 701352 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || ||||| ||||| || ||||| Sbjct 701353 CGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Score = 138 bits (152), Expect = 2e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || || || ||||| ||||| || ||||| Sbjct 701382 CCACCACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAC 701441 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| || ||||| || || | || ||||| || || Sbjct 701442 AAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 701501 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 ||||| ||||| || |||||||| | |||||| || || ||||| |||| | || || Sbjct 701502 ATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTGGACTCGAC 701560 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct 701561 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608 >seq27 Length=857455 Score = 122 bits (134), Expect = 2e-22 Identities = 318/475 (67%), Gaps = 20/475 (4%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || ||| |||||||||| ||| || | Sbjct 682344 CATGACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 682403 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || || |||||||||||| |||||||| | | | | ||| || || Sbjct 682404 AAGAGAGATACTCTCCATGAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCC 682463 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||||| |||||||| |||||||||| |||||| | ||||| Sbjct 682464 GAGGGCGACCAACAGCCGGTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTT 682523 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | || | || | ||||| | ||| |||| |||| |||| || || Sbjct 682524 CATGCCCAGGAGGCCGACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGC 682583 Query 10175 TTCCTCGACGATGCTCTTTACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 || ||| ||| || || || ||| ||| | | | ||| | | ||| Sbjct 682584 CTCAACGATGATATCCTCAACAACCTTCTTGTC--GGGGC-GATGGTT---TAAGTGCGA 682637 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 |||| || |||| | ||| || |||||||| || ||||| ||||||||| Sbjct 682638 GAACAGAAGGCAGGCAAAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGA 682697 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACC 10347 ||| ||||| ||||| | || || || ||||||||| |||| ||| || || | Sbjct 682698 GAAAGTGAGACCCGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCA-AAAGATC 682756 Query 10348 CGGAGAACAGAAGA--CCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAA 10399 | |||| |||||| |||||||| ||| | |||| || || |||| ||||| Sbjct 682757 CAGAGA--AGAAGATTCCCTCCACAGCA-GCGAAGGCCACAAGACGCTGGGCGAA 682808 >seq160 Length=150305 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 102198 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 102139 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || || || |||||||| || ||||| |||||||| ||| Sbjct 102138 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 102079 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 102078 ATGGTGTC-GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 102020 >seq95 Length=732127 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||| || || ||||| | || || || || | ||| ||| |||| || | || Sbjct 141691 GGGGAAACCTTCAAGCTGCTCGTTGTTGATGGCGCGCATCAGAGTAGTCTTACCGGTACC 141632 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 ||| || |||| || |||||| | | || ||||| | | ||| || |||||| Sbjct 141631 GTTAGGTCCGAGAAGACCGTAACGCTGACCACGCTTCAGGCGGAGAGAGGTCTGGTTCAG 141572 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||||||| |||||||||| || |||||| ||| | ||| || || ||||||||||| Sbjct 141571 CAGGATCTTGGCACCATAGGCCAGAGAGAACGTGCAGTTGCAGAGATCTTCACCCTCCTC 141512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921610545631880