Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq38 123 2e-23 seq65 87.8 2e-12 >seq38 Length=883156 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||| | || ||||| ||||||||||||||||| | Sbjct 701153 ACCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGA 701212 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | |||||||| ||||| || ||| | ||||| ||||| || |||||||| Sbjct 701213 CAAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGG 701272 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || | || || Sbjct 701273 AATACCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGAC 701332 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||||| ||||| | ||| || |||||||||||||| Sbjct 701333 TTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || |||| |||||||| |||||||||||||| || | Sbjct 701381 ACCACCACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGA 701440 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || |||||||| || || |||| || ||||||||||| ||||| Sbjct 701441 CAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGG 701500 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || | || || || Sbjct 701501 GATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC 701560 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | ||| || ||||| |||||||| Sbjct 701561 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | ||||| || || | || || || |||||||||||||| | | Sbjct 700926 CCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAG 700985 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| | | | ||||| | |||||| || || | ||||| ||||||||||| || ||| Sbjct 700986 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 701045 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||| || || ||||| || || ||| || || | ||||||| || || || Sbjct 701046 ATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACC 701105 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| ||||| | || || ||||| || ||||| Sbjct 701106 TCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 >seq65 Length=534987 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | ||||| || || || |||||||| || | Sbjct 174121 ACCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 174180 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || |||| || ||||||||||| || | || || |||||||||||||| || Sbjct 174181 AAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGG 174240 Query 64336 AATTCCTTCTTTTTCT 64351 |||||| || || ||| Sbjct 174241 AATTCCCTCCTTGTCT 174256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638373318760