Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq27 152 5e-32 seq160 93.3 4e-14 seq38 91.5 1e-13 >seq27 Length=857455 Score = 152 bits (168), Expect = 5e-32 Identities = 342/508 (67%), Gaps = 23/508 (5%) Strand=Plus/Minus Query 52340 CAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CCACGCTGGCCGA 52396 ||| ||||| |||||||| |||| ||||| | || | | | || | ||| | Sbjct 682857 CAAGAAGGCCCAGTGGGCCATGACCTGGATTTCG---GATAAGGAATCTACTTTCGCCCA 682801 Query 52397 GCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCAT 52456 ||| | ||||||||||| || ||||| | || || || || ||||| |||| Sbjct 682800 GCGTCTTGTGGCCTTCGCTGCTGTGGAGGGAATCTTCTTCTCTGGATCTTTTGCTTCCAT 682741 Query 52457 CTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATC 52516 ||| | | || | | || | ||||| || || || ||| ||||||| | || || Sbjct 682740 CTTCTGGCTGAAGAAGCGTGGATTGATGCCGGGTCTCACTTTCTCCAACGAGCTCATCTC 682681 Query 52517 GCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGACGCGCGTGACCG 52575 || ||||| ||||||||||| |||||||| ||||| || | | ||| || Sbjct 682680 TCGTGACGAGGGACTGCACACTGACTTTGCCTGCCTTCTGTT------CTCGC---ACTT 682630 Query 52576 AAAAATTGGATTCGGACACGA----TCCTGAGCATGT--TCAAGGAGGCGGTGGCTATCG 52629 ||| | | || ||| || | |||| || | || ||||| ||||| |||| Sbjct 682629 AAACCATCGCCCCG-ACAAGAAGGTTGTTGAGGATATCATCGTTGAGGCTGTGGCCATCG 682571 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689 || ||||||| || || | ||| || || |||| || |||||||||||| | || | Sbjct 682570 AACAGGAGTTCTTGACAGACGCTCTTCCTGTCGGCCTCCTGGGCATGAACTCTAAGCTGA 682511 Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGT 52749 ||||| ||||||| ||||| || || || || |||||||| ||||| | |||| Sbjct 682510 TGTGCCAGTACATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCCCTCGGAAACAAGAAGT 682451 Query 52750 ACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCA 52809 ||| |||| ||| || || || || || ||| | | || || |||| || ||||||| Sbjct 682450 ACTACAACTCTCCAAACCCCTTCGACTTCATGGAGAGTATCTCTCTTGCAGGAAAGACCA 682391 Query 52810 ACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| || |||||||| || || || || Sbjct 682390 ACTTCTTTGAGAAGCGTGTTGGTGACTA 682363 >seq160 Length=150305 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 102200 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 102141 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || ||||| ||||| || || ||||| || ||||| ||| || || | |||| Sbjct 102140 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG- 102082 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 102081 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 102022 Query 138604 AAA 138606 ||| Sbjct 102021 AAA 102019 >seq38 Length=883156 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||||||||||||| || ||| || |||||| || || ||||| | Sbjct 701415 GATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCG 701474 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 | || || ||||| ||||| ||||| || || || || || ||| | || | || Sbjct 701475 AAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC-CTGAATCTTCGACTTGAC 701533 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||| | ||||| ||||| | || | || || || || ||||| | Sbjct 701534 ATTG-TCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCT 701592 Query 138599 TTACAAAAATCTGCATGG 138616 | || || || ||||||| Sbjct 701593 TGACGAAGATTTGCATGG 701610 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | ||| | | || ||||||||||||||||| || | Sbjct 701154 CCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGAC 701213 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || ||||| || || | | |||| ||||||||||| || ||||| Sbjct 701214 AAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGA 701273 Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || ||| | || | || |||| || | |||||| | ||||| | Sbjct 701274 ATACCCTCCTTATC-CTGAATCTTGCTCTTGACATTG-TCGATGGTGTCTGAAGACTCGA 701331 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || || || || ||||| || || ||||| ||||| Sbjct 701332 CTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256016824880