Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq27 152 5e-32
seq160 93.3 4e-14
seq38 91.5 1e-13
>seq27
Length=857455
Score = 152 bits (168), Expect = 5e-32
Identities = 342/508 (67%), Gaps = 23/508 (5%)
Strand=Plus/Minus
Query 52340 CAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CCACGCTGGCCGA 52396
||| ||||| |||||||| |||| ||||| | || | | | || | ||| |
Sbjct 682857 CAAGAAGGCCCAGTGGGCCATGACCTGGATTTCG---GATAAGGAATCTACTTTCGCCCA 682801
Query 52397 GCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCAT 52456
||| | ||||||||||| || ||||| | || || || || ||||| ||||
Sbjct 682800 GCGTCTTGTGGCCTTCGCTGCTGTGGAGGGAATCTTCTTCTCTGGATCTTTTGCTTCCAT 682741
Query 52457 CTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATC 52516
||| | | || | | || | ||||| || || || ||| ||||||| | || ||
Sbjct 682740 CTTCTGGCTGAAGAAGCGTGGATTGATGCCGGGTCTCACTTTCTCCAACGAGCTCATCTC 682681
Query 52517 GCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGACGCGCGTGACCG 52575
|| ||||| ||||||||||| |||||||| ||||| || | | ||| ||
Sbjct 682680 TCGTGACGAGGGACTGCACACTGACTTTGCCTGCCTTCTGTT------CTCGC---ACTT 682630
Query 52576 AAAAATTGGATTCGGACACGA----TCCTGAGCATGT--TCAAGGAGGCGGTGGCTATCG 52629
||| | | || ||| || | |||| || | || ||||| ||||| ||||
Sbjct 682629 AAACCATCGCCCCG-ACAAGAAGGTTGTTGAGGATATCATCGTTGAGGCTGTGGCCATCG 682571
Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689
|| ||||||| || || | ||| || || |||| || |||||||||||| | || |
Sbjct 682570 AACAGGAGTTCTTGACAGACGCTCTTCCTGTCGGCCTCCTGGGCATGAACTCTAAGCTGA 682511
Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGT 52749
||||| ||||||| ||||| || || || || |||||||| ||||| | ||||
Sbjct 682510 TGTGCCAGTACATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCCCTCGGAAACAAGAAGT 682451
Query 52750 ACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCA 52809
||| |||| ||| || || || || || ||| | | || || |||| || |||||||
Sbjct 682450 ACTACAACTCTCCAAACCCCTTCGACTTCATGGAGAGTATCTCTCTTGCAGGAAAGACCA 682391
Query 52810 ACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|||| || |||||||| || || || ||
Sbjct 682390 ACTTCTTTGAGAAGCGTGTTGGTGACTA 682363
>seq160
Length=150305
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || ||||| || || ||||| | |||
Sbjct 102200 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 102141
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| || ||||| ||||| || || ||||| || ||||| ||| || || | ||||
Sbjct 102140 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG- 102082
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 102081 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 102022
Query 138604 AAA 138606
|||
Sbjct 102021 AAA 102019
>seq38
Length=883156
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||||||||||||| || ||| || |||||| || || ||||| |
Sbjct 701415 GATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCG 701474
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| || || ||||| ||||| ||||| || || || || || ||| | || | ||
Sbjct 701475 AAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC-CTGAATCTTCGACTTGAC 701533
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | |||||| | ||||| ||||| | || | || || || || ||||| |
Sbjct 701534 ATTG-TCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCT 701592
Query 138599 TTACAAAAATCTGCATGG 138616
| || || || |||||||
Sbjct 701593 TGACGAAGATTTGCATGG 701610
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || | ||| | | || ||||||||||||||||| || |
Sbjct 701154 CCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGAC 701213
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || ||||| || || | | |||| ||||||||||| || |||||
Sbjct 701214 AAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGA 701273
Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || || || ||| | || | || |||| || | |||||| | ||||| |
Sbjct 701274 ATACCCTCCTTATC-CTGAATCTTGCTCTTGACATTG-TCGATGGTGTCTGAAGACTCGA 701331
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || || || || ||||| || || ||||| |||||
Sbjct 701332 CTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256016824880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |