Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq38 89.7 4e-13
>seq38
Length=883156
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| |||| | | || | ||| || || || || ||||| ||||||||||| |
Sbjct 701154 CCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCA--G 701211
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || || | ||||| | ||| || ||||| | || | ||||||||| ||| |
Sbjct 701212 ACAAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAG 701271
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| || ||||| || ||| ||||| || ||| | || || || || | || |
Sbjct 701272 GAATACCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGA 701331
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||| || || || || || || ||||| || || ||||||||||||
Sbjct 701332 CTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCATA 701381
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045
|| || || |||||||||||| ||| | ||| | ||||| || || || |||||| |
Sbjct 700962 TCCTTCTGAATGTTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAG 701021
Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105
|| | |||||| ||||| |||||||| |||||||| || ||||| || || |
Sbjct 701022 ATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTG 701081
Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165
|| || ||||| || || || | |||||||| || || || || || || ||
Sbjct 701082 TCGATTGTATCAGAGGACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACG 701141
Query 15166 AAAATTTGCATA 15177
|| || ||||||
Sbjct 701142 AAGATCTGCATA 701153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357387517969265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |