Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq27 129 9e-25 seq40 123 4e-23 >seq27 Length=857455 Score = 129 bits (142), Expect = 9e-25 Identities = 285/425 (67%), Gaps = 7/425 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| || ||||||||||| || | | || || |||||||| |||| ||||| Sbjct 682377 CTTCTCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATACTCTCCATGAAGTCGAAGGGGTT 682436 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 || ||| |||| |||||| || ||| || || ||| || || || || Sbjct 682437 TGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACCAACAGCCGGTCAGCAACGAACTC 682496 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||| |||||| ||| | |||| || ||||| || | || || || || || | Sbjct 682497 AATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGGCCGACAGGAAGAGCGTCTGT 682556 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA-CGTTCGTACC 159887 || ||||||| || || | || || || | || | | ||| | ||| | | Sbjct 682557 CAAGAACTCCTGTTCGATGGCCACAGCCTCAACGATGATATCCTCAACAACCTTCTTGTC 682616 Query 159888 CCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 ||| || || || | ||||| ||||| |||||||| |||||||||| Sbjct 682617 GGGGCGATGGTTTAAGTGCGAG-----AACAGAAGGCAGGCAAAGTCAGTGTGCAGTCCC 682671 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| |||||||||| ||||||||| | |||| |||||||| | |||||| || Sbjct 682672 TCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGCATCAATCCACGCTTCTTC 682731 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 ||||| || |||| ||||||| || || ||||| |||||||| || || || ||| Sbjct 682732 AGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGGCC 682791 Query 160067 ACGAG 160071 || || Sbjct 682792 ACAAG 682796 >seq40 Length=974685 Score = 123 bits (136), Expect = 4e-23 Identities = 466/722 (65%), Gaps = 12/722 (2%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || || |||||||||| ||||| | || | | ||| ||||||||||| ||| Sbjct 724765 TCAACAGTAAACTGAATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATGCCAGTC 724706 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||| ||| ||| || | |||||| | || |||| || | | || || Sbjct 724705 TTCAGACCCATCTTCCATCCAGCAAAGTGCATACTGGTGAGCTTGCCCATGGTAGGCTCC 724646 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATA 204022 || ||||||||||||||| || ||||| ||||||| | || || |||||||| Sbjct 724645 TTCAGGTGAATGTTCAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATT 724586 Query 204023 TTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGA 204082 | | |||| ||| || || |||||||| |||||| | | | | ||| Sbjct 724585 TGCAGGATGGCACGCTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTAATGTCGGCG 724526 Query 204083 GGCACATCTTCCCACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTC 204141 || | || | | || |||| || | || || || || | | || || | | Sbjct 724525 GGAATAT-TGGGAATGTTCTGAACGGAACCACCATCCGCGATGATACGGTTCTTCATGTT 724467 Query 204142 CTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAA 204201 ||| ||||| ||| | || || ||| | || ||||||| || ||| || Sbjct 724466 GTCCGACCACAGGCCAAGGTCGACAAGATCCTTGAGAAGCCACGGGTTGACGACCTGGAA 724407 Query 204202 GTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTT 204261 || || | || || | || | | | | ||| |||| | || ||||| ||||| Sbjct 724406 CTCACCAGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCGAAACATTCGTT 724347 Query 204262 GTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCG 204321 | ||| | |||||| |||||| || |||||||| || |||| | || |||||| Sbjct 724346 GAAGCCCAGAATCTGGCTGGTGCTTGCAGTGGGCATTGGTGCCACCAACAAACTGTTGCG 724287 Query 204322 CACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTT 204380 |||||||| | | | | || ||| ||||||| |||||| | | |||| Sbjct 724286 CACACCGT-TCTGGGCAATCTTCGCCTTCAGAGCATCCCAGTCCCAGAGGTCCGTGGGGG 724228 Query 204381 TCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCG 204440 | | |||||||||| |||| | ||| |||||| ||| || ||||| ||| ||| Sbjct 724227 TTCTGTCCCACATGTCATACTGGAGGATACCTTGAGAGACGGGAGAGCCCTCGTAGGTCT 724168 Query 204441 GATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGC---GTGATAGTACA 204497 |||||| | ||| | ||||||| || || || | || || ||||||| | Sbjct 724167 CATAAGGACCAAACTCCTTGGCCAGCTCACAAGAAGCAGTCAGAGCACCGTGATAG---A 724111 Query 204498 TGGTCTCAAAGATCTGAACGTTTAATCTGGC-GGCCTCCGTTCCGTCAAACGCCAGACCC 204556 |||||||||||||||| | |||| | ||| | |||||| | ||| || | ||||| | Sbjct 724110 TGGTCTCAAAGATCTGGATGTTT-AGCTGTCTGGCCTCGGCAGAGTCGAATGGCAGACGC 724052 Query 204557 AG 204558 || Sbjct 724051 AG 724050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795144972316240