Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq38 147 2e-30 seq160 111 2e-19 seq663 102 9e-17 seq65 95.1 1e-14 >seq38 Length=883156 Score = 147 bits (162), Expect = 2e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || ||||||||||| | |||||| |||| || |||||||| || ||||| Sbjct 701418 TCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAA 701477 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||||||| | || | || |||||| ||| |||||| ||||| | Sbjct 701478 ATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTG 701537 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||||| || || || |||| |||||||| |||||||| || || || || Sbjct 701538 TCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACG 701597 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 701598 AAGATTTGCAT 701608 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||||| || | || |||||||| || || ||||| ||||| || || | | | Sbjct 700937 ACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAGAGGGTCCTCCC 700996 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | |||||| || ||||| || | ||||||||||| | || | | |||||| Sbjct 700997 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTT 701056 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| |||||| |||| | ||| | | | || || || || || |||| || | Sbjct 701057 GTCTTGGATCTTGCTCTTCA-CGTTGTCGATTGTATCAGAGGACTCAACCTCCAGTGTAA 701115 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || || || || ||||| ||||| Sbjct 701116 TGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 >seq160 Length=150305 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || || |||||||| || ||||| | Sbjct 102200 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 102141 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 102140 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 102081 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||||||||| || || || | || ||||| || |||||||| || || || | Sbjct 102080 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 102021 Query 46584 A 46584 | Sbjct 102020 A 102020 >seq663 Length=274 Score = 102 bits (112), Expect = 9e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| ||| ||||| || || || |||||||| |||||||| | || ||| Sbjct 159 ACCAGGTGCAGGGTAGATTCCTTCTGAATGTTATAGTCGGAGAGAGTGCGGCCATCCTCG 218 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||||||||| ||||| ||||||||||||||||| | || | || |||||| || Sbjct 219 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 274 >seq65 Length=534987 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| || || || || |||| || Sbjct 174139 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCGTCCTC 174198 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||||||||||| ||||| |||| ||||||||||||| || | | ||||||||| Sbjct 174199 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC 174255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231129621080