Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq38 125 7e-24 seq160 111 2e-19 seq65 104 2e-17 >seq38 Length=883156 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||||||||| ||||||||| | || |||||| ||| | Sbjct 701608 ATGCAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 701549 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | || || ||||| || || | ||||| Sbjct 701548 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 701489 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||| || || |||||||| |||| ||||| | |||||||||| Sbjct 701488 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAAC 701429 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||||||| |||| || || | || || ||| || | || || Sbjct 701428 ATTCAAAAGGAATCGACTCTTCACCTCGTCCTTCGTCTGCGTGGTGG 701382 Score = 114 bits (126), Expect = 1e-20 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||| || | || || ||| || | Sbjct 701152 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 701093 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | |||| | |||| || |||| ||||| |||||||||||| | |||| Sbjct 701092 GATACAATCGACAACG--TGAAGAGCAAGATCCAAGACAAGGAGGGAATTCCCCCAGACC 701035 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||| |||| || | | | |||||| ||| |||| Sbjct 701034 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACA 700975 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || ||||| ||| || || || ||||||||||| || | || || Sbjct 700974 ACATTCAGAAGGAGAGC-ACTCTCCACCTGGTGCTGCGTCTGCGCGGTGG 700926 >seq160 Length=150305 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 102020 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 102079 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || | || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 102080 GACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTG 102139 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || ||||| || || | |||||||| | ||||||||||||||| ||| Sbjct 102140 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 102199 Query 38433 G 38433 | Sbjct 102200 G 102200 >seq65 Length=534987 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| |||||||||||| ||||||| ||||| || || | ||| ||||| ||||| || Sbjct 174255 GACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 174196 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| || ||||| |||||||||||||| ||||| |||| ||||| | ||||| Sbjct 174195 GACGGCCGTACCCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 174136 Query 38457 CG 38458 || Sbjct 174135 CG 174134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166366527360