Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq38 125 7e-24
seq160 111 2e-19
seq65 104 2e-17
>seq38
Length=883156
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||||||||| ||||||||| | || |||||| ||| |
Sbjct 701608 ATGCAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 701549
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || || | || || ||||| || || | |||||
Sbjct 701548 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 701489
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| ||| || || |||||||| |||| ||||| | ||||||||||
Sbjct 701488 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAAC 701429
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| ||||||||| |||| || || | || || ||| || | || ||
Sbjct 701428 ATTCAAAAGGAATCGACTCTTCACCTCGTCCTTCGTCTGCGTGGTGG 701382
Score = 114 bits (126), Expect = 1e-20
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||| || | || || ||| || |
Sbjct 701152 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 701093
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | |||| | |||| || |||| ||||| |||||||||||| | ||||
Sbjct 701092 GATACAATCGACAACG--TGAAGAGCAAGATCCAAGACAAGGAGGGAATTCCCCCAGACC 701035
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| || || ||| |||| || | | | |||||| ||| ||||
Sbjct 701034 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACA 700975
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||| || ||||| ||| || || || ||||||||||| || | || ||
Sbjct 700974 ACATTCAGAAGGAGAGC-ACTCTCCACCTGGTGCTGCGTCTGCGCGGTGG 700926
>seq160
Length=150305
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | |
Sbjct 102020 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 102079
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || | || |||| ||||| ||||| || ||| | ||||| ||||| ||
Sbjct 102080 GACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTG 102139
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| || || ||||| || || | |||||||| | ||||||||||||||| |||
Sbjct 102140 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 102199
Query 38433 G 38433
|
Sbjct 102200 G 102200
>seq65
Length=534987
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||||||| ||||||| ||||| || || | ||| ||||| ||||| ||
Sbjct 174255 GACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 174196
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| || ||||| |||||||||||||| ||||| |||| ||||| | |||||
Sbjct 174195 GACGGCCGTACCCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 174136
Query 38457 CG 38458
||
Sbjct 174135 CG 174134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500166366527360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |